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WormBase Tree Display for Gene: WBGene00019869

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Name Class

WBGene00019869SMapS_parentSequenceR04E5
IdentityVersion2
NameCGC_namecnnm-2Person_evidenceWBPerson32343
WBPerson32344
Sequence_nameR04E5.2
Molecular_nameR04E5.2
R04E5.2.1
CE53658
Other_nameCELE_R04E5.2Accession_evidenceNDBBX284606
Public_namecnnm-2
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:02WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
204 Jan 2016 15:29:00WBPerson2970Name_changeCGC_namecnnm-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcnnm
Allele (78)
RNASeq_FPKM (74)
GO_annotation (13)
Ortholog (41)
ParalogWBGene00007255Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011260Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016343Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016879Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_description (2)
Disease_infoPotential_modelDOID:0060884Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:103)
EFO:MONDO:0014631Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:103)
DOID:0111404Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:105)
Molecular_infoCorresponding_CDSR04E5.2
Corresponding_CDS_historyR04E5.2:wp272
Corresponding_transcriptR04E5.2.1
Other_sequenceMIC02161_1
EL784675.1
EL784329.1
MI04241
MI01658
Associated_featureWBsf648382
WBsf1006254
WBsf1006255
WBsf1023471
WBsf1023472
WBsf1023473
WBsf236090
Experimental_infoRNAi_resultWBRNAi00002417Inferred_automaticallyRNAi_primary
WBRNAi00051245Inferred_automaticallyRNAi_primary
WBRNAi00017407Inferred_automaticallyRNAi_primary
WBRNAi00017409Inferred_automaticallyRNAi_primary
Expr_patternExpr1014513
Expr1038618
Expr1154947
Expr2010278
Expr2028520
Drives_constructWBCnstr00025532
Construct_productWBCnstr00025532
Microarray_resultsSMD_R04E5.1
SMD_R04E5.2
179762_at
179763_s_at
A_12_P113829
Aff_R04E5.1
Aff_R04E5.2
GPL13394_WBGene00019869
GPL13914_R04E5.2
GPL14144_R04E5.2_1548-1607_0.907_19_B
GPL14144_R04E5.2_1834-1893_0.897_20_C
GPL14144_R04E5.2_1932-1991_0.908_18_A
GPL19516_CGZ0030827
GPL21109_R04E5.2
GPL3518_CE28746
GPL8304_CE_WBGene00019869_A
GPL8673_R04E5_2P01320
GPL8673_R04E5_2P02184
GPL8673_R04E5_2P02202
GPL9450_R04E5.2
cea2.p.151319
Expression_cluster (131)
InteractionWBInteraction000237184
WBInteraction000411098
WBInteraction000465345
Map_infoMapXPosition0.410087
PositivePositive_cloneR04E5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00050045
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene