WormBase Tree Display for Gene: WBGene00018890
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| WBGene00018890 | SMap | S_parent | Sequence | F55F8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F55F8.2 | |||||||
| Molecular_name | F55F8.2a | ||||||||
| F55F8.2a.1 | |||||||||
| CE11190 | |||||||||
| F55F8.2b | |||||||||
| Other_name | CELE_F55F8.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | F55F8.2 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (34) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Contained_in_operon | CEOP1276 | ||||||||
| Ortholog (37) | |||||||||
| Paralog (37) | |||||||||
| Structured_description | Concise_description | F55F8.2 encodes a DEAD-box helicase; loss of F55F8.2 activity via RNAi indicates that F55F8.2 activity is required for positive regulation of growth rate, larval development, vulval morphogenesis, cuticle development, reproduction, and the overall health of the animal. | Paper_evidence | WBPaper00005599 | |||||
| WBPaper00006395 | |||||||||
| WBPaper00024497 | |||||||||
| WBPaper00025054 | |||||||||
| WBPaper00031057 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 09 Oct 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable several functions, including ATP binding activity; RNA binding activity; and RNA helicase activity. Predicted to be located in nucleolus. Is an ortholog of human DDX24 (DEAD-box helicase 24). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F55F8.2a | |||||||
| Corresponding_CDS_history | F55F8.2b:wp256 | ||||||||
| Corresponding_transcript | F55F8.2b | ||||||||
| F55F8.2a.1 | |||||||||
| Other_sequence (36) | |||||||||
| Associated_feature | WBsf219463 | ||||||||
| Experimental_info | RNAi_result (14) | ||||||||
| Expr_pattern | Expr1016259 | ||||||||
| Expr1038149 | |||||||||
| Expr1152311 | |||||||||
| Expr2004233 | |||||||||
| Expr2022456 | |||||||||
| Drives_construct | WBCnstr00026209 | ||||||||
| Construct_product | WBCnstr00026209 | ||||||||
| Microarray_results | SMD_F55F8.2 | ||||||||
| 188904_s_at | |||||||||
| A_12_P109815 | |||||||||
| Aff_F55F8.2 | |||||||||
| GPL13394_WBGene00018890 | |||||||||
| GPL13914_F55F8.2 | |||||||||
| GPL14144_F55F8.2a_1508-1567_0.906_12_C | |||||||||
| GPL14144_F55F8.2a_1582-1641_0.908_11_A | |||||||||
| GPL14144_F55F8.2a_1753-1812_0.910_10_B | |||||||||
| GPL19516_CGZ0024359 | |||||||||
| GPL19516_CGZ0024360 | |||||||||
| GPL21109_F55F8.2a | |||||||||
| GPL3518_CE11190 | |||||||||
| GPL8304_CE_WBGene00018890_A | |||||||||
| GPL8673_F55F8_2aP00852 | |||||||||
| GPL8673_F55F8_2aP01343 | |||||||||
| GPL8673_F55F8_2aP01819 | |||||||||
| GPL8673_F55F8_2bP00351 | |||||||||
| GPL8673_F55F8_2bP00842 | |||||||||
| GPL8673_F55F8_2bP01318 | |||||||||
| GPL9450_F55F8.2 | |||||||||
| cea2.p.12072 | |||||||||
| Expression_cluster (111) | |||||||||
| Interaction (226) | |||||||||
| Map_info | Positive | Positive_clone | F55F8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 0.288148 | |||||||
| Reference | WBPaper00028451 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
