WormBase Tree Display for Gene: WBGene00018717
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WBGene00018717 | SMap | S_parent | Sequence | F52H2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F52H2.5 | |||||||
Molecular_name | F52H2.5 | ||||||||
F52H2.5.1 | |||||||||
CE10872 | |||||||||
F52H2.5.2 | |||||||||
Other_name | CELE_F52H2.5 | Accession_evidence | NDB | BX284606 | |||||
Public_name | F52H2.5 | ||||||||
DB_info | Database | AceView | gene | XD176 | |||||
WormQTL | gene | WBGene00018717 | |||||||
WormFlux | gene | WBGene00018717 | |||||||
NDB | locus_tag | CELE_F52H2.5 | |||||||
NCBI | gene | 186133 | |||||||
RefSeq | protein | NM_001392735.1 | |||||||
TREEFAM | TREEFAM_ID | TF317407 | |||||||
TrEMBL | UniProtAcc | O17396 | |||||||
UniProt_GCRP | UniProtAcc | O17396 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (32) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (18) | |||||||||
Structured_description | Concise_description | F52H2.5 encodes a novel protein conserved amongst nematodes. | Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 06 Jan 2011 00:00:00 | ||||||||
Automated_description | Enriched in several structures, including germ line; germline precursor cell; intestine; mechanosensory neurons; and rectal epithelium based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-12; and hsf-1 based on tiling array; RNA-seq; and microarray studies. Is affected by nine chemicals including rotenone; Alovudine; and Zidovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F52H2.5 | |||||||
Corresponding_transcript | F52H2.5.1 | ||||||||
F52H2.5.2 | |||||||||
Associated_feature | WBsf653766 | ||||||||
WBsf237094 | |||||||||
WBsf237095 | |||||||||
Experimental_info | RNAi_result | WBRNAi00015439 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015438 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00048025 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032639 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (5) | |||||||||
Drives_construct | WBCnstr00026319 | ||||||||
Construct_product | WBCnstr00026319 | ||||||||
Microarray_results | SMD_F52H2.5 | ||||||||
SMD_F52H2.6 | |||||||||
181114_at | |||||||||
A_12_P117549 | |||||||||
Aff_F52H2.5 | |||||||||
GPL13394_WBGene00018717 | |||||||||
GPL13914_F52H2.5 | |||||||||
GPL14144_F52H2.5_303-362_0.916_11_B | |||||||||
GPL14144_F52H2.5_461-520_0.925_5_C | |||||||||
GPL14144_F52H2.5_733-792_0.944_2_A | |||||||||
GPL19516_CGZ0023261 | |||||||||
GPL19516_CGZ0023262 | |||||||||
GPL19516_CGZ0023263 | |||||||||
GPL21109_F52H2.5.1 | |||||||||
GPL21109_F52H2.6 | |||||||||
GPL3518_CE10872 | |||||||||
GPL8304_CE_WBGene00018717_A | |||||||||
GPL8673_F52H2_5P00252 | |||||||||
GPL8673_F52H2_5P00279 | |||||||||
GPL8673_F52H2_5P00626 | |||||||||
GPL9450_F52H2.5 | |||||||||
cea2.i.54460 | |||||||||
Expression_cluster (77) | |||||||||
Interaction | WBInteraction000328063 | ||||||||
WBInteraction000544083 | |||||||||
WBInteraction000546984 | |||||||||
WBInteraction000547070 | |||||||||
WBInteraction000547754 | |||||||||
WBInteraction000548242 | |||||||||
WBInteraction000548243 | |||||||||
WBInteraction000548244 | |||||||||
Map_info | Positive | Positive_clone | F52H2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | X | -14.3991 | |||||||
Method | Gene |