WormBase Tree Display for Gene: WBGene00017678
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WBGene00017678 | SMap | S_parent | Sequence | F21F8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | asp-12 | Person_evidence | WBPerson261 | |||||
Sequence_name | F21F8.4 | ||||||||
Molecular_name | F21F8.4 | ||||||||
F21F8.4.1 | |||||||||
CE09540 | |||||||||
F21F8.4.2 | |||||||||
Other_name | CELE_F21F8.4 | Accession_evidence | NDB | BX284605 | |||||
Public_name | asp-12 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 23 Nov 2012 14:10:21 | WBPerson2970 | Name_change | CGC_name | asp-12 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | asp | ||||||||
Allele (42) | |||||||||
Strain | WBStrain00055352 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00024932 | ||||||||
00024933 | |||||||||
00024934 | |||||||||
00024935 | |||||||||
00024936 | |||||||||
00024937 | |||||||||
00024938 | |||||||||
00024939 | |||||||||
00122998 | |||||||||
00122999 | |||||||||
Contained_in_operon | CEOP5539 | ||||||||
Ortholog (32) | |||||||||
Paralog (17) | |||||||||
Structured_description | Automated_description | Predicted to enable aspartic-type endopeptidase activity. Involved in innate immune response. Predicted to be located in lysosome. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); chronic fatigue syndrome; and congenital adrenal hyperplasia. Is an ortholog of human REN (renin). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model (17) | ||||||||
Molecular_info | Corresponding_CDS | F21F8.4 | |||||||
Corresponding_transcript | F21F8.4.1 | ||||||||
F21F8.4.2 | |||||||||
Other_sequence (69) | |||||||||
Associated_feature | WBsf646997 | ||||||||
WBsf1000612 | |||||||||
WBsf232088 | |||||||||
Experimental_info | RNAi_result | WBRNAi00045230 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00045229 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00013693 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00115183 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00089050 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00076325 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (3) | |||||||||
Drives_construct | WBCnstr00027108 | ||||||||
Construct_product | WBCnstr00027108 | ||||||||
Microarray_results | SMD_F21F8.4 | ||||||||
188441_at | |||||||||
A_12_P101085 | |||||||||
Aff_F21F8.4 | |||||||||
GPL13394_WBGene00017678 | |||||||||
GPL13914_F21F8.4 | |||||||||
GPL14144_F21F8.4_1113-1172_0.942_5_B | |||||||||
GPL14144_F21F8.4_724-783_0.697_146_C | |||||||||
GPL14144_F21F8.4_962-1021_0.956_1_A | |||||||||
GPL19516_CGZ0017369 | |||||||||
GPL19516_CGZ0017370 | |||||||||
GPL21109_F21F8.4.1 | |||||||||
GPL3518_CE09540 | |||||||||
GPL8304_CE_WBGene00017678_A | |||||||||
GPL8673_F21F8_4P00270 | |||||||||
GPL8673_F21F8_4P00481 | |||||||||
GPL8673_F21F8_4P00917 | |||||||||
GPL9450_F21F8.4 | |||||||||
cea2.p.114229 | |||||||||
Expression_cluster (338) | |||||||||
Interaction (32) | |||||||||
Map_info | Map | V | Position | 1.26094 | |||||
Positive | Positive_clone | F21F8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00028482 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00060662 | |||||||||
WBPaper00062322 | |||||||||
WBPaper00064284 | |||||||||
WBPaper00064728 | |||||||||
WBPaper00064841 | |||||||||
WBPaper00065681 | |||||||||
WBPaper00065877 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |