WormBase Tree Display for Gene: WBGene00017054
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WBGene00017054 | SMap | S_parent | Sequence | D2024 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | gstk-2 | Person_evidence | WBPerson1763 | |||
Sequence_name | D2024.7 | ||||||
Molecular_name | D2024.7 | ||||||
D2024.7.1 | |||||||
CE04296 | |||||||
Other_name | CELE_D2024.7 | Accession_evidence | NDB | BX284604 | |||
Public_name | gstk-2 | ||||||
DB_info | Database (12) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | gstk | ||||||
Allele (31) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (15) | |||||||
Ortholog (37) | |||||||
Paralog | WBGene00014251 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00020314 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Concise_description | gstk-2 encodes one of two C. elegans kappa class glutathione transferases; while gstk-2(RNAi) animals exhibit no obvious developmental or morphological abnormalities, animals doubly mutant for gstk-2 and gstk-1 exhibit decreased respiration and a lower concentration of the monounsaturated fatty acid cis-vaccenic acid; GSTK-2 is expressed primarily in the pharynx, muscles, and epidermis and localizes to mitochondria. | Paper_evidence | WBPaper00035091 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 14 Aug 2009 00:00:00 | ||||||
Automated_description | Predicted to enable glutathione peroxidase activity and glutathione transferase activity. Predicted to be involved in glutathione metabolic process. Located in mitochondrion. Expressed in body wall musculature; intestine; and pharynx. Is an ortholog of human GSTK1 (glutathione S-transferase kappa 1). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | D2024.7 | |||||
Corresponding_transcript | D2024.7.1 | ||||||
Other_sequence | CBC12524_1 | ||||||
Associated_feature | WBsf996915 | ||||||
WBsf996916 | |||||||
WBsf230235 | |||||||
WBsf230236 | |||||||
WBsf230237 | |||||||
Experimental_info | RNAi_result (11) | ||||||
Expr_pattern | Expr8776 | ||||||
Expr1021154 | |||||||
Expr1037327 | |||||||
Expr1147459 | |||||||
Expr2012335 | |||||||
Expr2030572 | |||||||
Drives_construct | WBCnstr00013514 | ||||||
WBCnstr00027605 | |||||||
Construct_product | WBCnstr00013514 | ||||||
WBCnstr00027605 | |||||||
Microarray_results | SMD_D2024.7 | ||||||
187178_s_at | |||||||
A_12_P106208 | |||||||
Aff_D2024.7 | |||||||
GPL13394_WBGene00017054 | |||||||
GPL13914_D2024.7 | |||||||
GPL14144_D2024.7_11-70_0.913_13_A | |||||||
GPL14144_D2024.7_348-407_0.899_20_C | |||||||
GPL14144_D2024.7_555-614_0.885_22_B | |||||||
GPL19516_CGZ0013801 | |||||||
GPL19516_CGZ0013802 | |||||||
GPL21109_D2024.13 | |||||||
GPL21109_D2024.7.1 | |||||||
GPL21109_D2024.7.2 | |||||||
GPL3518_CE04296 | |||||||
GPL8304_CE_WBGene00017054_A | |||||||
GPL8673_D2024_7P00265 | |||||||
GPL8673_D2024_7P00524 | |||||||
GPL8673_D2024_7P00602 | |||||||
GPL9450_D2024.7 | |||||||
cea2.c.27258 | |||||||
Expression_cluster (134) | |||||||
Interaction (6) | |||||||
Map_info | Map | IV | Position | 3.31178 | Error | 0.000439 | |
Positive | Positive_clone | D2024 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00035091 | ||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |