WormBase Tree Display for Gene: WBGene00009945
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WBGene00009945 | SMap | S_parent | Sequence | F52H3 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name (5) | |||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | bath | ||||||
Allele (24) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (26) | |||||||
Paralog (80) | |||||||
Structured_description | Automated_description | Expressed in several structures, including hypodermis and pharynx. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; TRAF-like; SKP1/BTB/POZ domain superfamily; and BTB/POZ domain. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F52H3.3 | |||||
Corresponding_CDS_history | F52H3.3a:wp264 | ||||||
F52H3.3b:wp264 | |||||||
Corresponding_transcript | F52H3.3.1 | ||||||
Other_sequence (44) | |||||||
Associated_feature | WBsf650480 | ||||||
WBsf665227 | |||||||
WBsf666001 | |||||||
WBsf989222 | |||||||
WBsf1012953 | |||||||
WBsf223749 | |||||||
Experimental_info | RNAi_result | WBRNAi00090589 | Inferred_automatically | RNAi_primary | |||
WBRNAi00015442 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00032644 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00048030 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00094875 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00092973 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr145 | ||||||
Expr2100 | |||||||
Expr1012479 | |||||||
Expr1034333 | |||||||
Expr1151848 | |||||||
Expr2009554 | |||||||
Expr2027791 | |||||||
Drives_construct | WBCnstr00031796 | ||||||
Construct_product | WBCnstr00031796 | ||||||
Microarray_results | SMD_F52H3.3 | ||||||
173877_s_at | |||||||
A_12_P109219 | |||||||
Aff_F52H3.3 | |||||||
GPL13394_WBGene00009945 | |||||||
GPL13914_F52H3.3 | |||||||
GPL14144_F52H3.3_380-439_0.864_45_C | |||||||
GPL14144_F52H3.3_510-569_0.915_8_A | |||||||
GPL14144_F52H3.3_634-693_0.913_11_B | |||||||
GPL19516_CGZ0023272 | |||||||
GPL21109_F52H3.3 | |||||||
GPL3518_CE03399 | |||||||
GPL8304_CE_WBGene00009945_A | |||||||
GPL8673_F52H3_3P00002 | |||||||
GPL8673_F52H3_3P00715 | |||||||
GPL8673_F52H3_3P01031 | |||||||
GPL9450_F52H3.3 | |||||||
cea2.p.40278 | |||||||
Expression_cluster (138) | |||||||
Interaction (13) | |||||||
Map_info | Map | II | Position | 1.83513 | Error | 0.003981 | |
Positive | Positive_clone | F52H3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |