WormBase Tree Display for Gene: WBGene00009051
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| WBGene00009051 | SMap | S_parent | Sequence | F22D6 | |||
|---|---|---|---|---|---|---|---|
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | nduf | ||||||
| Allele | WBVar02154164 | ||||||
| WBVar01499786 | |||||||
| WBVar01499054 | |||||||
| WBVar00297993 | |||||||
| WBVar00647630 | |||||||
| WBVar00647631 | |||||||
| WBVar00337546 | |||||||
| WBVar01498959 | |||||||
| Strain | WBStrain00049344 | ||||||
| RNASeq_FPKM (73) | |||||||
| GO_annotation (12) | |||||||
| Ortholog (36) | |||||||
| Structured_description | Concise_description | F22D6.4 encodes an NDUFS6/13 kDa subunit of the mitochondrial NADH dehydrogenase (ubiquinone) complex (complex I); F22D6.4 is required for oxidative phosphorylation and for resistance to volatile anesthetics. | Paper_evidence | WBPaper00005928 | |||
| WBPaper00028429 | |||||||
| Curator_confirmed | WBPerson1843 | ||||||
| WBPerson567 | |||||||
| Date_last_updated | 13 Dec 2006 00:00:00 | ||||||
| Automated_description | Involved in mitochondrial electron transport, NADH to ubiquinone and response to xenobiotic stimulus. Located in mitochondrion. Human ortholog(s) of this gene implicated in cervical cancer and nuclear type mitochondrial complex I deficiency 9. Is an ortholog of human NDUFS6 (NADH:ubiquinone oxidoreductase subunit S6). | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Disease_info | Potential_model | DOID:0112073 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7713) | ||
| DOID:4362 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7713) | ||||
| Molecular_info | Corresponding_CDS | F22D6.4 | |||||
| Corresponding_transcript | F22D6.4.1 | ||||||
| Other_sequence (40) | |||||||
| Associated_feature | WBsf643423 | ||||||
| WBsf981038 | |||||||
| WBsf217941 | |||||||
| WBsf217942 | |||||||
| Experimental_info | RNAi_result (17) | ||||||
| Expr_pattern | Expr1018697 | ||||||
| Expr1033947 | |||||||
| Expr1149241 | |||||||
| Expr2013934 | |||||||
| Expr2032173 | |||||||
| Drives_construct | WBCnstr00032497 | ||||||
| Construct_product | WBCnstr00032497 | ||||||
| Microarray_results | SMD_F22D6.4 | ||||||
| 193168_at | |||||||
| A_12_P114520 | |||||||
| Aff_F22D6.4 | |||||||
| GPL13394_WBGene00009051 | |||||||
| GPL13914_F22D6.4 | |||||||
| GPL14144_F22D6.4_206-265_0.943_2_B | |||||||
| GPL14144_F22D6.4_363-422_0.953_1_A | |||||||
| GPL14144_F22D6.4_37-96_0.933_4_C | |||||||
| GPL19516_CGZ0017520 | |||||||
| GPL19516_CGZ0017521 | |||||||
| GPL21109_F22D6.4.1 | |||||||
| GPL3518_CE05685 | |||||||
| GPL8304_CE_WBGene00009051_A | |||||||
| GPL8304_CE_WBGene00009051_B | |||||||
| GPL8673_F22D6_4P00105 | |||||||
| GPL8673_F22D6_4P00212 | |||||||
| GPL8673_F22D6_4P00351 | |||||||
| GPL9450_F22D6.4 | |||||||
| cea2.i.01822 | |||||||
| Expression_cluster (94) | |||||||
| Interaction (81) | |||||||
| Map_info | Map | I | Position | 1.72178 | Error | 0.00283 | |
| Positive | Positive_clone | F22D6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Pseudo_map_position | |||||||
| Reference | WBPaper00005928 | ||||||
| WBPaper00028429 | |||||||
| WBPaper00038491 | |||||||
| WBPaper00055090 | |||||||
| WBPaper00062388 | |||||||
| WBPaper00064339 | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
