WormBase Tree Display for Gene: WBGene00006730
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WBGene00006730 | Evidence | CGC_data_submission | |||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F39B2 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | uev | ||||||
Allele (20) | |||||||
Strain | WBStrain00032660 | ||||||
WBStrain00037221 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (16) | |||||||
Contained_in_operon | CEOP1764 | ||||||
Ortholog (42) | |||||||
Paralog (18) | |||||||
Structured_description | Concise_description | uev-1 encodes a ubiquitin-conjugating enzyme (UBC or E2) variant that contains the characteristic UBC motif, but lacks the critical active-site cysteine residue necessary for catalytic activity; UEV-1 activity is required cell autonomously for normal trafficking of the GLR-1 glutamate receptor and consequently, for normal locomotory behavior; UEV-1 physically interacts with the UBC-13 ubiquitin conjugating enzyme that is also required for normal locomotory behavior and that is also likely involved in the DNA damage response; a uev-1::gfp reporter fusion is expressed in a wide variety of tissues including the pharynx, neurons, muscle cells, vulva, intestine, distal tip cell, and cells in the anus/tail; UEV-1 reporter fusions localize to nuclei, the cytosol, and ventral cord neurites. | Paper_evidence | WBPaper00005039 | |||
WBPaper00005337 | |||||||
WBPaper00037956 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 07 Feb 2011 00:00:00 | ||||||
Automated_description | Enables ubiquitin conjugating enzyme binding activity. Involved in regulation of locomotion involved in locomotory behavior and regulation of protein localization to cell surface. Located in cytosol; neuron projection; and nucleus. Expressed in several structures, including anus; distal tip cell; germ line; neurons; and ventral nerve cord. Is an ortholog of human UBE2V2 (ubiquitin conjugating enzyme E2 V2). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F39B2.2 | |||||
Corresponding_transcript | F39B2.2.1 | ||||||
Other_sequence (59) | |||||||
Associated_feature | WBsf643859 | ||||||
WBsf657109 | |||||||
WBsf986228 | |||||||
WBsf218828 | |||||||
Experimental_info | RNAi_result | WBRNAi00116884 | Inferred_automatically | RNAi_primary | |||
WBRNAi00003632 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00046755 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00076399 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00082831 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr9183 | ||||||
Expr9184 | |||||||
Expr9707 | |||||||
Expr1010234 | |||||||
Expr1032806 | |||||||
Expr1150629 | |||||||
Expr2017742 | |||||||
Expr2035881 | |||||||
Drives_construct | WBCnstr00013774 | ||||||
Construct_product | WBCnstr00013774 | ||||||
WBCnstr00013775 | |||||||
Microarray_results | SMD_F39B2.2 | ||||||
187984_at | |||||||
A_12_P119513 | |||||||
Aff_F39B2.2 | |||||||
GPL13394_WBGene00006730 | |||||||
GPL13914_F39B2.2 | |||||||
GPL14144_F39B2.2_232-291_0.938_12_C | |||||||
GPL14144_F39B2.2_318-377_0.973_1_A | |||||||
GPL14144_F39B2.2_56-115_0.944_8_B | |||||||
GPL19516_CGZ0020617 | |||||||
GPL19516_CGZ0020618 | |||||||
GPL21109_F39B2.2.1 | |||||||
GPL3518_CE16008 | |||||||
GPL8304_CE_WBGene00006730_A | |||||||
GPL8304_CE_WBGene00006730_B | |||||||
GPL8304_CE_WBGene00006730_C | |||||||
GPL8673_F39B2_2P00066 | |||||||
GPL8673_F39B2_2P00167 | |||||||
GPL8673_F39B2_2P00238 | |||||||
GPL9450_F39B2.2 | |||||||
cea2.c.03402 | |||||||
Expression_cluster (117) | |||||||
Interaction (93) | |||||||
Map_info | Map | I | Position | 26.8835 | Error | 0.138356 | |
Positive | Positive_clone | F39B2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 4669 | |||||
Pseudo_map_position | |||||||
Reference (16) | |||||||
Remark | Sequence connection from [Jones D, Crowe E, Stevens TA, Candido EPM], 02/06/10 krb | ||||||
Sequence connection from [Boulton S, Vidal M] | |||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |