WormBase Tree Display for Gene: WBGene00006461
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WBGene00006461 | SMap | S_parent | Sequence | M01D7 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | tag-96 | Person_evidence | WBPerson201 | |||
Sequence_name | M01D7.4 | ||||||
Molecular_name | M01D7.4a | ||||||
M01D7.4a.1 | |||||||
CE36705 | |||||||
M01D7.4b | |||||||
CE49705 | |||||||
M01D7.4b.1 | |||||||
Other_name | CELE_M01D7.4 | Accession_evidence | NDB | BX284601 | |||
Public_name | tag-96 | ||||||
DB_info | Database | AceView | gene | 1C323 | |||
WormQTL | gene | WBGene00006461 | |||||
WormFlux | gene | WBGene00006461 | |||||
NDB | locus_tag | CELE_M01D7.4 | |||||
Panther | gene | CAEEL|WormBase=WBGene00006461|UniProtKB=O01969 | |||||
family | PTHR10457 | ||||||
NCBI | gene | 171755 | |||||
RefSeq | protein | NM_058508.4 | |||||
NM_001306427.3 | |||||||
TrEMBL | UniProtAcc | X5LVA8 | |||||
O01969 | |||||||
UniProt_GCRP | UniProtAcc | O01969 | |||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | tag | ||||||
Allele (171) | |||||||
Strain | WBStrain00003030 | ||||||
WBStrain00031372 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (20) | |||||||
Contained_in_operon | CEOP1993 | ||||||
Ortholog (42) | |||||||
Paralog | WBGene00021534 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Concise_description | tag-96 encodes a galactokinase that is a member of the GHMP family of kinases and closely related to the vertebrate galactokinase 2 (GALK2) carbohydrate kinases. | Curator_confirmed | WBPerson1843 | |||
Date_last_updated | 13 Jun 2007 00:00:00 | ||||||
Automated_description | Predicted to enable galactokinase activity. Predicted to be involved in galactose metabolic process. Predicted to be located in cytosol. Is an ortholog of human GALK2 (galactokinase 2). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | M01D7.4a | |||||
M01D7.4b | |||||||
Corresponding_transcript | M01D7.4a.1 | ||||||
M01D7.4b.1 | |||||||
Other_sequence (22) | |||||||
Associated_feature | WBsf643070 | ||||||
WBsf982770 | |||||||
WBsf982771 | |||||||
WBsf217261 | |||||||
Experimental_info | RNAi_result | WBRNAi00002067 | Inferred_automatically | RNAi_primary | |||
WBRNAi00050745 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram807 | ||||||
Expr6400 | |||||||
Expr1017971 | |||||||
Expr1032632 | |||||||
Expr1154442 | |||||||
Expr2017293 | |||||||
Expr2035428 | |||||||
Drives_construct | WBCnstr00003530 | ||||||
WBCnstr00034349 | |||||||
Construct_product | WBCnstr00034349 | ||||||
Microarray_results | SMD_M01D7.4 | ||||||
189072_at | |||||||
A_12_P105002 | |||||||
Aff_M01D7.4 | |||||||
GPL13394_WBGene00006461 | |||||||
GPL13914_M01D7.4 | |||||||
GPL14144_M01D7.4_1003-1062_0.929_1_A | |||||||
GPL14144_M01D7.4_496-555_0.905_8_B | |||||||
GPL14144_M01D7.4_644-703_0.916_3_C | |||||||
GPL19516_CGZ0029612 | |||||||
GPL21109_M01D7.4 | |||||||
GPL3518_CE26379 | |||||||
GPL8304_CE_WBGene00006461_A | |||||||
GPL8304_CE_WBGene00006461_B | |||||||
GPL8304_CE_WBGene00006461_C | |||||||
GPL8673_M01D7_4P00052 | |||||||
GPL8673_M01D7_4P00275 | |||||||
GPL8673_M01D7_4P01020 | |||||||
GPL9450_M01D7.4 | |||||||
cea2.p.14738 | |||||||
Expression_cluster (109) | |||||||
Interaction (49) | |||||||
Map_info | Map | I | Position | -12.4988 | Error | 0.004641 | |
Positive | Positive_clone | M01D7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5657 | |||||
4536 | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |