WormBase Tree Display for Gene: WBGene00004339
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WBGene00004339 | Evidence | CGC_data_submission | |||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C39E9 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | rfc-3 | Person_evidence | WBPerson1551 | |||||
Sequence_name | C39E9.13 | ||||||||
Molecular_name | C39E9.13 | ||||||||
C39E9.13.1 | |||||||||
CE05396 | |||||||||
Other_name | CELE_C39E9.13 | Accession_evidence | NDB | BX284604 | |||||
Public_name | rfc-3 | ||||||||
DB_info | Database | AceView | gene | 4N861 | |||||
WormQTL | gene | WBGene00004339 | |||||||
WormFlux | gene | WBGene00004339 | |||||||
NDB | locus_tag | CELE_C39E9.13 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00004339|UniProtKB=Q18547 | |||||||
family | PTHR11669 | ||||||||
NCBI | gene | 178259 | |||||||
RefSeq | protein | NM_070116.9 | |||||||
TREEFAM | TREEFAM_ID | TF105724 | |||||||
TrEMBL | UniProtAcc | Q18547 | |||||||
UniProt_GCRP | UniProtAcc | Q18547 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | rfc | ||||||||
Allele (23) | |||||||||
Strain | WBStrain00051187 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00061616 | ||||||||
00061617 | |||||||||
00061618 | |||||||||
00061619 | |||||||||
00061620 | |||||||||
00061621 | |||||||||
00112692 | |||||||||
00112693 | |||||||||
Contained_in_operon | CEOP4528 | ||||||||
Ortholog (36) | |||||||||
Paralog | WBGene00004338 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00004340 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00018409 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable DNA binding activity. Predicted to contribute to DNA clamp loader activity. Predicted to be involved in DNA repair and DNA-templated DNA replication. Predicted to be located in nucleus. Predicted to be part of DNA replication factor C complex. Is an ortholog of human RFC3 (replication factor C subunit 3). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C39E9.13 | |||||||
Corresponding_transcript | C39E9.13.1 | ||||||||
Other_sequence (38) | |||||||||
Associated_feature | WBsf659815 | ||||||||
WBsf977015 | |||||||||
WBsf229385 | |||||||||
Experimental_info | RNAi_result | WBRNAi00008506 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00007957 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00042218 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00000155 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00103213 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00064084 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00024783 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00106721 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1021222 | ||||||||
Expr1032157 | |||||||||
Expr1146209 | |||||||||
Expr2015305 | |||||||||
Expr2033539 | |||||||||
Drives_construct | WBCnstr00035556 | ||||||||
Construct_product | WBCnstr00035556 | ||||||||
Microarray_results | SMD_C39E9.13 | ||||||||
193615_at | |||||||||
A_12_P117651 | |||||||||
A_12_P167474 | |||||||||
A_12_P167475 | |||||||||
A_12_P167476 | |||||||||
Aff_C39E9.13 | |||||||||
GPL13394_WBGene00004339 | |||||||||
GPL13914_C39E9.13 | |||||||||
GPL14144_C39E9.13_669-728_0.945_3_A | |||||||||
GPL14144_C39E9.13_829-888_0.883_38_C | |||||||||
GPL14144_C39E9.13_985-1044_0.940_5_B | |||||||||
GPL19516_CGZ0008246 | |||||||||
GPL21109_C39E9.13 | |||||||||
GPL3518_CE05396 | |||||||||
GPL8304_CE_WBGene00004339_A | |||||||||
GPL8304_CE_WBGene00004339_B | |||||||||
GPL8673_C39E9_13P00079 | |||||||||
GPL8673_C39E9_13P00469 | |||||||||
GPL8673_C39E9_13P00813 | |||||||||
GPL9450_C39E9.13 | |||||||||
cea2.p.87680 | |||||||||
Expression_cluster (163) | |||||||||
Interaction (219) | |||||||||
Map_info | Map | IV | Position | 7.86285 | Error | 0.014603 | |||
Positive | Positive_clone | C39E9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00005736 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00048493 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00064957 | |||||||||
Remark (2) | |||||||||
Method | Gene |