WormBase Tree Display for Gene: WBGene00004099
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WBGene00004099 | SMap | S_parent | Sequence | C03A7 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name (5) | |||||||
DB_info | Database | AceView | gene | 5F633 | |||
WormQTL | gene | WBGene00004099 | |||||
WormFlux | gene | WBGene00004099 | |||||
NDB | locus_tag | CELE_C03A7.4 | |||||
Panther | gene | CAEEL|WormBase=WBGene00004099|UniProtKB=O16500 | |||||
family | PTHR31895 | ||||||
NCBI | gene | 182136 | |||||
RefSeq | protein | NM_071981.6 | |||||
TREEFAM | TREEFAM_ID | TF315535 | |||||
TrEMBL | UniProtAcc | O16500 | |||||
UniProt_GCRP | UniProtAcc | O16500 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | abu | ||||||
Allele (23) | |||||||
Strain | WBStrain00037133 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00028183 | ||||||
00028184 | |||||||
Ortholog (20) | |||||||
Paralog (30) | |||||||
Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||
WBPaper00012788 | |||||||
WBPaper00012830 | |||||||
WBPaper00012882 | |||||||
WBPaper00012897 | |||||||
WBPaper00013003 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Involved in endoplasmic reticulum unfolded protein response and pharynx development. Expressed in pharyngeal muscle cell. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C03A7.4 | |||||
Corresponding_transcript | C03A7.4.1 | ||||||
Associated_feature | WBsf999941 | ||||||
WBsf1019592 | |||||||
WBsf1019593 | |||||||
WBsf231734 | |||||||
Experimental_info | RNAi_result (28) | ||||||
Expr_pattern | Expr12494 | ||||||
Expr1028993 | |||||||
Expr1143588 | |||||||
Expr2009108 | |||||||
Expr2027344 | |||||||
Drives_construct | WBCnstr00021223 | ||||||
WBCnstr00037942 | |||||||
Construct_product | WBCnstr00037942 | ||||||
Microarray_results | SMD_C03A7.4 | ||||||
172321_x_at | |||||||
172323_x_at | |||||||
172360_x_at | |||||||
172587_x_at | |||||||
194211_x_at | |||||||
A_12_P104940 | |||||||
A_12_P135005 | |||||||
A_12_P135006 | |||||||
A_12_P145356 | |||||||
Aff_C03A7.4 | |||||||
GPL14144_C03A7.4_939-998_0.960_1_A | |||||||
GPL19516_CGZ0002107 | |||||||
GPL19516_CGZ0002110 | |||||||
GPL19516_CGZ0002111 | |||||||
GPL21109_C03A7.4 | |||||||
GPL21109_C03A7.7 | |||||||
GPL21109_C03A7.8 | |||||||
GPL3518_CE07862 | |||||||
GPL8304_CE_WBGene00004099_A | |||||||
GPL8673_C03A7_4P00372 | |||||||
GPL8673_C03A7_4P00885 | |||||||
GPL8673_C03A7_4P00931 | |||||||
GPL8673_C03A7_7P00373 | |||||||
GPL8673_C03A7_7P00885 | |||||||
GPL8673_C03A7_8P01037 | |||||||
GPL9450_C03A7.4 | |||||||
cea2.d.10235 | |||||||
cea2.d.10245 | |||||||
cea2.d.10251 | |||||||
Expression_cluster (196) | |||||||
Interaction (127) | |||||||
WBProcess | WBbiopr:00000046 | ||||||
WBbiopr:00000079 | |||||||
Map_info | Map | V | Position | -2.43732 | Error | 0.004959 | |
Positive | Positive_clone | C03A7 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00026929 | ||||||
WBPaper00032003 | |||||||
WBPaper00038304 | |||||||
WBPaper00040821 | |||||||
WBPaper00045541 | |||||||
WBPaper00045960 | |||||||
WBPaper00055090 | |||||||
WBPaper00064648 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |