WormBase Tree Display for Gene: WBGene00003986
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| WBGene00003986 | SMap | S_parent | Sequence | K05B2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mct-4 | Paper_evidence | WBPaper00041876 | |||||
| Person_evidence | WBPerson3620 | ||||||||
| Sequence_name | K05B2.5 | ||||||||
| Molecular_name | K05B2.5a | ||||||||
| K05B2.5a.1 | |||||||||
| CE34052 | |||||||||
| K05B2.5b | |||||||||
| CE39589 | |||||||||
| K05B2.5c | |||||||||
| CE39590 | |||||||||
| K05B2.5a.2 | |||||||||
| K05B2.5b.1 | |||||||||
| K05B2.5c.1 | |||||||||
| Other_name | pes-22 | Person_evidence | WBPerson266 | ||||||
| CELE_K05B2.5 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | mct-4 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00003986 | |||||
| WormFlux | gene | WBGene00003986 | |||||||
| NDB | locus_tag | CELE_K05B2.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003986|UniProtKB=H2L0E6 | |||||||
| family | PTHR11360 | ||||||||
| NCBI | gene | 180766 | |||||||
| RefSeq | protein | NM_001383567.1 | |||||||
| NM_001373286.4 | |||||||||
| NM_001047802.3 | |||||||||
| TrEMBL | UniProtAcc | H2L0E6 | |||||||
| Q2L6X7 | |||||||||
| H2L0E5 | |||||||||
| UniProt_GCRP | UniProtAcc | H2L0E6 | |||||||
| OMIM | gene | 600682 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 09 Jan 2013 14:40:36 | WBPerson2970 | Name_change (2) | ||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mct | ||||||||
| Allele (147) | |||||||||
| Legacy_information | [C.elegansII] NMK. pes-22:lacZ expressed behind pharyngeal terminal bulb, probably lobes of excretorygl and cell. L1 larvae have apparent gut nuclear staining. Clone UL#161G10, cosmid K05B2. [UL] | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00023019 | ||||||||
| 00023020 | |||||||||
| 00023021 | |||||||||
| 00023022 | |||||||||
| 00112111 | |||||||||
| 00112112 | |||||||||
| Ortholog (57) | |||||||||
| Paralog | WBGene00020168 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015676 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00010340 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021227 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00015273 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00008214 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010834 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00013353 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00017369 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable monocarboxylic acid transmembrane transporter activity. Predicted to be involved in monocarboxylic acid transport. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in familial hyperinsulinemic hypoglycemia 7 and lymphangioleiomyomatosis. Is an ortholog of several human genes including SLC16A1 (solute carrier family 16 member 1); SLC16A7 (solute carrier family 16 member 7); and SLC16A8 (solute carrier family 16 member 8). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3319 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10922) | ||||
| DOID:0070214 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10922) | ||||||
| Molecular_info | Corresponding_CDS | K05B2.5a | |||||||
| K05B2.5b | |||||||||
| K05B2.5c | |||||||||
| Corresponding_CDS_history | K05B2.5:wp99 | ||||||||
| K05B2.5:wp153 | |||||||||
| Corresponding_transcript | K05B2.5a.1 | ||||||||
| K05B2.5a.2 | |||||||||
| K05B2.5b.1 | |||||||||
| K05B2.5c.1 | |||||||||
| Other_sequence (28) | |||||||||
| Associated_feature (16) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00016620 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00084916 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001163 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00090682 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049968 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr54 | ||||||||
| Expr1021530 | |||||||||
| Expr1031904 | |||||||||
| Expr1153664 | |||||||||
| Expr2013458 | |||||||||
| Expr2031692 | |||||||||
| Drives_construct | WBCnstr00037947 | ||||||||
| Construct_product | WBCnstr00037947 | ||||||||
| Microarray_results | SMD_K05B2.5 | ||||||||
| 174930_at | |||||||||
| 184026_at | |||||||||
| A_12_P110458 | |||||||||
| A_12_P156390 | |||||||||
| A_12_P156391 | |||||||||
| A_12_P156392 | |||||||||
| Aff_K05B2.5 | |||||||||
| GPL13394_WBGene00003986 | |||||||||
| GPL13914_K05B2.5 | |||||||||
| GPL14144_K05B2.5b_1740-1799_0.916_6_C | |||||||||
| GPL14144_K05B2.5b_1880-1939_0.915_7_B | |||||||||
| GPL14144_K05B2.5b_2151-2210_0.950_1_A | |||||||||
| GPL19516_CGZ0027896 | |||||||||
| GPL19516_CGZ0027897 | |||||||||
| GPL19516_CGZ0027898 | |||||||||
| GPL19516_CGZ0027899 | |||||||||
| GPL21109_K05B2.5a.1 | |||||||||
| GPL21109_K05B2.5a.2 | |||||||||
| GPL21109_K05B2.5c | |||||||||
| GPL3518_CE31198 | |||||||||
| GPL8304_CE_WBGene00003986_A | |||||||||
| GPL8673_K05B2_5aP00829 | |||||||||
| GPL8673_K05B2_5aP01177 | |||||||||
| GPL8673_K05B2_5aP01590 | |||||||||
| GPL8673_K05B2_5bP02088 | |||||||||
| GPL8673_K05B2_5bP02131 | |||||||||
| GPL8673_K05B2_5bP02153 | |||||||||
| GPL8673_K05B2_5cP00994 | |||||||||
| GPL8673_K05B2_5cP01342 | |||||||||
| GPL8673_K05B2_5cP01755 | |||||||||
| GPL9450_K05B2.5 | |||||||||
| cea2.p.149291 | |||||||||
| Expression_cluster (198) | |||||||||
| Interaction (32) | |||||||||
| Map_info | Map | X | Position | -6.21278 | |||||
| Positive | Positive_clone | K05B2 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062388 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
