WormBase Tree Display for Gene: WBGene00003885
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| WBGene00003885 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y41G9A | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | osm-5 | Person_evidence | WBPerson242 | |||||
| Sequence_name | Y41G9A.1 | ||||||||
| Molecular_name | Y41G9A.1 | ||||||||
| Y41G9A.1.1 | |||||||||
| CE28361 | |||||||||
| Other_name | CELE_Y41G9A.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | osm-5 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info (11) | |||||||||
| Disease_info | Experimental_model | DOID:898 | Homo sapiens | Paper_evidence | WBPaper00004603 | ||||
| WBPaper00004715 | |||||||||
| Accession_evidence | OMIM | 173900 | |||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 30 Apr 2018 00:00:00 | ||||||||
| Disease_relevance | Studies in the worm C. elegans have contributed extensively to the finding that cystic kidney diseases can be considered ciliopathies; osm-5 is orthologous to the murine polycystic kidney disease gene Tg737, which encodes the protein Polaris and human IFT88; both polaris and OSM-5 have the tetratricopeptide repeat (TPT), a motif that mediates protein-protein interactions; the association of pathologies in mice mutant for Tg737 with ciliary defects in the kidney cells and studies in elegans that demonstrate that osm-5 is expressed and migrates within cilia, substantiate a ciliogenic role for polaris and osm-5, possibly as components of the intraflagellar transport (IFT) system; osm-5 is also required for correct ciliary targeting of lov-1 and pkd-2, genes that are orthologous to human PKD1 and PKD2, which are mutated in human autosomal dominant polycystic kidney disease. | Homo sapiens | Paper_evidence | WBPaper00004603 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 31 Jan 2013 00:00:00 | ||||||||
| Models_disease_in_annotation | WBDOannot00000030 | ||||||||
| Models_disease_asserted | WBDOannot00000513 | ||||||||
| Molecular_info | Corresponding_CDS | Y41G9A.1 | |||||||
| Corresponding_transcript | Y41G9A.1.1 | ||||||||
| Other_sequence (25) | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00095205 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056418 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (13) | |||||||||
| Drives_construct (12) | |||||||||
| Construct_product | WBCnstr00006237 | ||||||||
| WBCnstr00008467 | |||||||||
| WBCnstr00009069 | |||||||||
| WBCnstr00010229 | |||||||||
| WBCnstr00013368 | |||||||||
| WBCnstr00039933 | |||||||||
| Antibody | WBAntibody00000351 | ||||||||
| WBAntibody00001248 | |||||||||
| Microarray_results | SMD_Y41G9A.G | ||||||||
| 188197_at | |||||||||
| 188198_s_at | |||||||||
| A_12_P115179 | |||||||||
| GPL13394_WBGene00003885 | |||||||||
| GPL13914_Y41G9A.1 | |||||||||
| GPL14144_Y41G9A.1_2007-2066_0.931_5_C | |||||||||
| GPL14144_Y41G9A.1_2077-2136_0.940_4_B | |||||||||
| GPL14144_Y41G9A.1_2383-2442_0.965_1_A | |||||||||
| GPL19516_CGZ0046016 | |||||||||
| GPL21109_Y41G9A.1 | |||||||||
| GPL3518_CE28361 | |||||||||
| GPL8304_CE_WBGene00003885_A | |||||||||
| GPL8304_CE_WBGene00003885_B | |||||||||
| GPL8673_Y41G9A_1P01106 | |||||||||
| GPL8673_Y41G9A_1P01930 | |||||||||
| GPL8673_Y41G9A_1P02236 | |||||||||
| GPL9450_Y41G9A.1 | |||||||||
| cea2.c.48573 | |||||||||
| Expression_cluster (200) | |||||||||
| Interaction (43) | |||||||||
| WBProcess | WBbiopr:00000001 | ||||||||
| WBbiopr:00000012 | |||||||||
| Map_info | Map | X | Position | -12.6622 | Error | 0.00141 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | Y41G9A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data (3) | |||||||||
| Reference (105) | |||||||||
| Remark | Sequence connection from [Haycroft CG, Thomas JH] | ||||||||
| Data extracted from Haycraft et al (2001) | |||||||||
| Method | Gene |
