WormBase Tree Display for Gene: WBGene00003724
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| WBGene00003724 | SMap | S_parent | Sequence | F44C8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-134 | Person_evidence | WBPerson600 | |||||
| Sequence_name | F44C8.2 | ||||||||
| Molecular_name | F44C8.2 | ||||||||
| F44C8.2.1 | |||||||||
| CE17823 | |||||||||
| Other_name | CELE_F44C8.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-134 | ||||||||
| DB_info | Database | AceView | gene | 5C711 | |||||
| WormQTL | gene | WBGene00003724 | |||||||
| WormFlux | gene | WBGene00003724 | |||||||
| NDB | locus_tag | CELE_F44C8.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003724|UniProtKB=O16361 | |||||||
| family | PTHR45680 | ||||||||
| NCBI | gene | 185728 | |||||||
| RefSeq | protein | NM_071209.7 | |||||||
| SwissProt | UniProtAcc | O16361 | |||||||
| UniProt_GCRP | UniProtAcc | O16361 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (45) | |||||||||
| Strain | WBStrain00036620 | ||||||||
| WBStrain00036681 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00027922 | ||||||||
| 00027923 | |||||||||
| 00027924 | |||||||||
| 00027925 | |||||||||
| 00111693 | |||||||||
| 00111694 | |||||||||
| 00111695 | |||||||||
| 00111696 | |||||||||
| Contained_in_operon | CEOP5028 | ||||||||
| Ortholog (36) | |||||||||
| Paralog (217) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F44C8.2 | |||||||
| Corresponding_transcript | F44C8.2.1 | ||||||||
| Other_sequence | CBC13912_1 | ||||||||
| Associated_feature | WBsf646698 | ||||||||
| WBsf978436 | |||||||||
| WBsf999480 | |||||||||
| WBsf999481 | |||||||||
| WBsf1019275 | |||||||||
| WBsf1019276 | |||||||||
| WBsf231489 | |||||||||
| Transcription_factor | WBTranscriptionFactor000274 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00047265 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014916 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032226 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025038 | ||||||||
| Expr1031736 | |||||||||
| Expr1151120 | |||||||||
| Expr2014034 | |||||||||
| Expr2032274 | |||||||||
| Drives_construct | WBCnstr00035917 | ||||||||
| Construct_product | WBCnstr00035917 | ||||||||
| Microarray_results | SMD_F44C8.2 | ||||||||
| 190842_at | |||||||||
| A_12_P115225 | |||||||||
| Aff_F44C8.2 | |||||||||
| GPL13394_WBGene00003724 | |||||||||
| GPL13914_F44C8.2 | |||||||||
| GPL14144_F44C8.2_1105-1164_0.921_9_B | |||||||||
| GPL14144_F44C8.2_690-749_0.920_11_C | |||||||||
| GPL14144_F44C8.2_981-1040_0.955_1_A | |||||||||
| GPL19516_CGZ0021577 | |||||||||
| GPL19516_CGZ0021578 | |||||||||
| GPL21109_F44C8.2.1 | |||||||||
| GPL3518_CE17823 | |||||||||
| GPL8304_CE_WBGene00003724_A | |||||||||
| GPL8673_F44C8_2P00352 | |||||||||
| GPL8673_F44C8_2P00945 | |||||||||
| GPL8673_F44C8_2P01096 | |||||||||
| GPL9450_F44C8.2 | |||||||||
| cea2.p.116943 | |||||||||
| Expression_cluster (86) | |||||||||
| Interaction | WBInteraction000185065 | ||||||||
| WBInteraction000243077 | |||||||||
| WBInteraction000386152 | |||||||||
| Map_info | Map | V | Position | -15.2048 | Error | 0.007409 | |||
| Positive | Positive_clone | F44C8 | Inferred_automatically (2) | ||||||
| Mapping_data | Multi_point | 5202 | |||||||
| 5378 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
