WormBase Tree Display for Gene: WBGene00003155
expand all nodes | collapse all nodes | view schema
| WBGene00003155 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C25D7 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | mcm-3 | Person_evidence | WBPerson1160 | |||||
| Sequence_name | C25D7.6 | ||||||||
| Molecular_name | C25D7.6 | ||||||||
| C25D7.6.1 | |||||||||
| CE08392 | |||||||||
| Other_name | CELE_C25D7.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | mcm-3 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mcm | ||||||||
| Allele (50) | |||||||||
| Strain | WBStrain00047480 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (29) | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00003154 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00003158 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003156 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003157 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003159 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | mcm-3 encodes a member of the MCM2/3/5 family with similarity to human DNA replication licensing factor, MCM3, and affects embryonic viability. | Paper_evidence | WBPaper00005599 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 09 Aug 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable single-stranded DNA binding activity. Predicted to contribute to single-stranded DNA helicase activity. Predicted to be involved in DNA strand elongation involved in DNA replication; double-strand break repair via break-induced replication; and mitotic DNA replication initiation. Located in condensed chromosome and pronucleus. Expressed in ciliated neurons. Is an ortholog of human MCM3 (minichromosome maintenance complex component 3). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C25D7.6 | |||||||
| Corresponding_transcript | C25D7.6.1 | ||||||||
| Other_sequence (33) | |||||||||
| Associated_feature | WBsf653428 | ||||||||
| WBsf653429 | |||||||||
| WBsf669765 | |||||||||
| WBsf669766 | |||||||||
| WBsf977368 | |||||||||
| WBsf977369 | |||||||||
| WBsf977370 | |||||||||
| WBsf235021 | |||||||||
| Experimental_info | RNAi_result (16) | ||||||||
| Expr_pattern (8) | |||||||||
| Drives_construct | WBCnstr00036214 | ||||||||
| WBCnstr00042634 | |||||||||
| Construct_product | WBCnstr00009677 | ||||||||
| WBCnstr00036214 | |||||||||
| WBCnstr00042634 | |||||||||
| Antibody | WBAntibody00002984 | ||||||||
| Microarray_results | SMD_C25D7.6 | ||||||||
| 171893_x_at | |||||||||
| 193664_s_at | |||||||||
| A_12_P108011 | |||||||||
| Aff_C25D7.6 | |||||||||
| GPL13394_WBGene00003155 | |||||||||
| GPL13914_C25D7.6 | |||||||||
| GPL14144_C25D7.6_1912-1971_0.930_7_C | |||||||||
| GPL14144_C25D7.6_2264-2323_0.936_5_B | |||||||||
| GPL14144_C25D7.6_2349-2408_0.947_1_A | |||||||||
| GPL19516_CGZ0005882 | |||||||||
| GPL21109_C25D7.6 | |||||||||
| GPL3518_CE08392 | |||||||||
| GPL8304_CE_WBGene00003155_A | |||||||||
| GPL8304_CE_WBGene00003155_C | |||||||||
| GPL8673_C25D7_6P01344 | |||||||||
| GPL8673_C25D7_6P01601 | |||||||||
| GPL8673_C25D7_6P02061 | |||||||||
| GPL9450_C25D7.6 | |||||||||
| cea2.p.109594 | |||||||||
| Expression_cluster (210) | |||||||||
| Interaction (203) | |||||||||
| Map_info | Map | V | Position | 7.23535 | Error | 0.008915 | |||
| Positive | Positive_clone | C25D7 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Sequence connection from [Kim SK] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
