WormBase Tree Display for Gene: WBGene00002067
expand all nodes | collapse all nodes | view schema
WBGene00002067 | SMap | S_parent | Sequence | C43C3 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | ifp | |||||
Allele (100) | ||||||
Strain | WBStrain00032110 | |||||
WBStrain00032142 | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation (12) | ||||||
Ortholog (27) | ||||||
Paralog (12) | ||||||
Structured_description | Concise_description | ifp-1 encodes a nonessential intermediate filament protein; IFP-1 is predicted to function as a structural component of the cytoskeleton; IFP-1 has no obvious function in RNAi assays. | Paper_evidence | WBPaper00004651 | ||
WBPaper00004761 | ||||||
WBPaper00005654 | ||||||
Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 17 Jun 2004 00:00:00 | |||||
Automated_description | Predicted to be a structural constituent of cytoskeleton. Predicted to be involved in cellular localization; heterochromatin formation; and nucleus organization. Predicted to be located in nuclear envelope and nuclear lamina. Expressed in head; head neurons; intestine; pharynx; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | C43C3.1 | ||||
Corresponding_transcript | C43C3.1.1 | |||||
Other_sequence | CBC07359_1 | |||||
Associated_feature (11) | ||||||
Experimental_info | RNAi_result | WBRNAi00042369 | Inferred_automatically | RNAi_primary | ||
WBRNAi00007224 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00062658 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00113723 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00011878 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00062659 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00001853 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00062657 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00098350 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00113719 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr3400 | |||||
Expr3401 | ||||||
Expr13742 | ||||||
Expr13743 | ||||||
Expr15265 | ||||||
Expr1016212 | ||||||
Expr1031220 | ||||||
Expr1146355 | ||||||
Expr2012696 | ||||||
Expr2030932 | ||||||
Drives_construct | WBCnstr00011379 | |||||
WBCnstr00036480 | ||||||
WBCnstr00039966 | ||||||
WBCnstr00039967 | ||||||
WBCnstr00042146 | ||||||
Construct_product | WBCnstr00036480 | |||||
WBCnstr00039967 | ||||||
WBCnstr00042146 | ||||||
Antibody | WBAntibody00000798 | |||||
Microarray_results | SMD_C43C3.1 | |||||
191718_s_at | ||||||
A_12_P116117 | ||||||
Aff_C43C3.1 | ||||||
GPL13394_WBGene00002067 | ||||||
GPL13914_C43C3.1 | ||||||
GPL14144_C43C3.1_2209-2268_0.947_1_C | ||||||
GPL14144_C43C3.1_678-737_0.834_90_B | ||||||
GPL14144_C43C3.1_998-1057_0.834_89_A | ||||||
GPL19516_CGZ0008620 | ||||||
GPL21109_C43C3.1 | ||||||
GPL3518_CE01523 | ||||||
GPL8304_CE_WBGene00002067_A | ||||||
GPL8673_C43C3_1P01118 | ||||||
GPL8673_C43C3_1P01503 | ||||||
GPL8673_C43C3_1P01749 | ||||||
GPL9450_C43C3.1 | ||||||
cea2.c.42163 | ||||||
Expression_cluster (255) | ||||||
Interaction (91) | ||||||
Map_info (4) | ||||||
Reference | WBPaper00004761 | |||||
WBPaper00041022 | ||||||
WBPaper00055090 | ||||||
WBPaper00056033 | ||||||
WBPaper00056896 | ||||||
WBPaper00057758 | ||||||
WBPaper00059330 | ||||||
WBPaper00061750 | ||||||
WBPaper00065558 | ||||||
Remark | Sequence connection from [Karabinos A, Weber K]. krb 13/11/01 | |||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |