WormBase Tree Display for Gene: WBGene00001193
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WBGene00001193 | SMap | S_parent | Sequence | C23H3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | egl-26 | Person_evidence | WBPerson268 | |||||
Sequence_name | C23H3.1 | ||||||||
Molecular_name | C23H3.1a | ||||||||
C23H3.1a.1 | |||||||||
CE08320 | |||||||||
C23H3.1b | |||||||||
CE50533 | |||||||||
C23H3.1b.1 | |||||||||
Other_name | egl-48 | ||||||||
cog-4 | |||||||||
CELE_C23H3.1 | Accession_evidence | NDB | BX284602 | ||||||
Public_name | egl-26 | ||||||||
DB_info | Database | AceView | gene | 2A377 | |||||
WormQTL | gene | WBGene00001193 | |||||||
WormFlux | gene | WBGene00001193 | |||||||
NDB | locus_tag | CELE_C23H3.1 | |||||||
Panther | gene | CAEEL|EnsemblGenome=WBGene00001193|UniProtKB=P91082 | |||||||
family | PTHR36948 | ||||||||
NCBI | gene | 173392 | |||||||
RefSeq | protein | NM_001313583.2 | |||||||
NM_061251.6 | |||||||||
SwissProt | UniProtAcc | P91082 | |||||||
UniProt_GCRP | UniProtAcc | P91082 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | egl | ||||||||
Reference_allele | WBVar00089528 | ||||||||
Allele (31) | |||||||||
Legacy_information | n481 : variable bloating Type A many animals form bag-of-worms (60%); abnormal vulva. ES2 adult. NA1. | ||||||||
See also e1952, n481 | |||||||||
[C.elegansII] n481 : variable bloating, insensitive to serotonin and imipramine; 60% adults form bag-of-worms; abnormal vulva; suppressor of Tra-3. ES2 adult. ME3. OA1: e1952 (pka egl-48, HME1/2, stronger suppressor of Tra-3). [Trent et al. 1983; Hodgkin 1986; CB; MT] | |||||||||
Strain | WBStrain00026509 | ||||||||
WBStrain00026781 | |||||||||
WBStrain00026856 | |||||||||
WBStrain00004534 | |||||||||
WBStrain00004636 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (15) | |||||||||
Ortholog (27) | |||||||||
Structured_description | Concise_description | egl-26 encodes a protein that contains an H-box and an NC domain that is a member of the LRAT (lecithin retinol acyltransferase) subfamily of the NlpC/P60 superfamily of enzymes; egl-26 activity is required for fertility, egg laying, and vulval development, specifically the connection of the uterus to the vulva mediated by proper morphogenesis of vulF, the most dorsal vulval cell; EGL-26 is an apical membrane protein that is expressed in many cells, including vulF, and appears to be expressed near the vulva and uterus only during the L4 larval stage; EGL-26 membrane localization is necessary for its function. | Paper_evidence | WBPaper00000635 | |||||
WBPaper00005103 | |||||||||
WBPaper00030762 | |||||||||
Curator_confirmed | WBPerson48 | ||||||||
WBPerson1843 | |||||||||
Date_last_updated | 07 Aug 2007 00:00:00 | ||||||||
Automated_description | Predicted to enable acyltransferase activity. Involved in several processes, including egg-laying behavior; positive regulation of vulval development; and vulval development. Located in cytoplasmic side of apical plasma membrane. Expressed in several structures, including buccal cavity; excretory canal; hermaphrodite gonad; rectum; and vulval cell. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C23H3.1a | |||||||
C23H3.1b | |||||||||
Corresponding_transcript | C23H3.1a.1 | ||||||||
C23H3.1b.1 | |||||||||
Other_sequence | CR12698 | ||||||||
CJC02584_1 | |||||||||
CGC00868_1 | |||||||||
CRC04517_1 | |||||||||
Associated_feature | WBsf654854 | ||||||||
WBsf717611 | |||||||||
WBsf717612 | |||||||||
WBsf986311 | |||||||||
WBsf986312 | |||||||||
Experimental_info | RNAi_result (12) | ||||||||
Expr_pattern (11) | |||||||||
Drives_construct | WBCnstr00000797 | ||||||||
WBCnstr00006433 | |||||||||
WBCnstr00010463 | |||||||||
WBCnstr00011411 | |||||||||
WBCnstr00019607 | |||||||||
WBCnstr00022871 | |||||||||
WBCnstr00037038 | |||||||||
Construct_product | WBCnstr00006433 | ||||||||
WBCnstr00010463 | |||||||||
WBCnstr00037038 | |||||||||
Microarray_results | SMD_C23H3.1 | ||||||||
179740_s_at | |||||||||
A_12_P107317 | |||||||||
Aff_C23H3.1 | |||||||||
GPL13394_WBGene00001193 | |||||||||
GPL13914_C23H3.1 | |||||||||
GPL14144_C23H3.1_461-520_0.907_11_C | |||||||||
GPL14144_C23H3.1_741-800_0.917_8_B | |||||||||
GPL14144_C23H3.1_845-904_0.967_1_A | |||||||||
GPL19516_CGZ0005543 | |||||||||
GPL21109_C23H3.1 | |||||||||
GPL3518_CE08320 | |||||||||
GPL8304_CE_WBGene00001193_A | |||||||||
GPL8304_CE_WBGene00001193_B | |||||||||
GPL8673_C23H3_1P00102 | |||||||||
GPL8673_C23H3_1P00283 | |||||||||
GPL8673_C23H3_1P00866 | |||||||||
GPL9450_C23H3.1 | |||||||||
cea2.i.09384 | |||||||||
Expression_cluster (102) | |||||||||
Interaction (62) | |||||||||
Map_info | Map | II | Position | -16.2721 | Error | 0.158173 | |||
Positive | Positive_clone | C23H3 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | 2_point | 797 | |||||||
2632 | |||||||||
7078 | |||||||||
7112 | |||||||||
Multi_point (5) | |||||||||
Pos_neg_data | 4724 | ||||||||
Reference (25) | |||||||||
Remark | Sequence connection from [Hanna-Rose W, Han M] | ||||||||
cog-4 added as an other name. krb 04/03/02 | |||||||||
Method | Gene |