WormBase Tree Display for Gene: WBGene00000665
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WBGene00000665 | Evidence | Person_evidence | WBPerson345 | ||||||
---|---|---|---|---|---|---|---|---|---|
WBPerson651 | |||||||||
SMap | S_parent | Sequence | C29E4 | ||||||
Identity | Version | 1 | |||||||
Name (5) | |||||||||
DB_info | Database | AceView | gene | 3J39 | |||||
WormQTL | gene | WBGene00000665 | |||||||
WormFlux | gene | WBGene00000665 | |||||||
NDB | locus_tag | CELE_C29E4.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000665|UniProtKB=P34340 | |||||||
family | PTHR24637 | ||||||||
NCBI | gene | 176117 | |||||||
RefSeq | protein | NM_066328.6 | |||||||
SwissProt | UniProtAcc | P34340 | |||||||
TREEFAM | TREEFAM_ID | TF319043 | |||||||
UniProt_GCRP | UniProtAcc | P34340 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | col | ||||||||
Allele (23) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (4) | |||||||||
Ortholog (32) | |||||||||
Paralog (165) | |||||||||
Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C29E4.1 | |||||||
Corresponding_transcript | C29E4.1.1 | ||||||||
Other_sequence (23) | |||||||||
Associated_feature | WBsf659211 | ||||||||
WBsf225309 | |||||||||
WBsf225310 | |||||||||
WBsf225311 | |||||||||
WBsf225312 | |||||||||
WBsf225313 | |||||||||
Experimental_info | RNAi_result | WBRNAi00041442 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00027194 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00011322 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00024666 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00029310 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00007443 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00005165 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1028656 | ||||||||
Expr1030392 | |||||||||
Expr1145471 | |||||||||
Expr2010437 | |||||||||
Expr2028677 | |||||||||
Drives_construct | WBCnstr00037386 | ||||||||
Construct_product | WBCnstr00037386 | ||||||||
Microarray_results | SMD_C29E4.1 | ||||||||
177024_at | |||||||||
A_12_P117774 | |||||||||
Aff_C29E4.1 | |||||||||
GPL13394_WBGene00000665 | |||||||||
GPL13914_C29E4.1 | |||||||||
GPL14144_C29E4.1_214-273_0.906_23_C | |||||||||
GPL14144_C29E4.1_711-770_0.962_2_B | |||||||||
GPL14144_C29E4.1_844-903_0.964_1_A | |||||||||
GPL19516_CGZ0006559 | |||||||||
GPL21109_C29E4.1 | |||||||||
GPL3518_CE00083 | |||||||||
GPL8304_CE_WBGene00000665_A | |||||||||
GPL8304_CE_WBGene00000665_B | |||||||||
GPL8673_C29E4_1P00058 | |||||||||
GPL8673_C29E4_1P00576 | |||||||||
GPL8673_C29E4_1P00818 | |||||||||
GPL9450_C29E4.1 | |||||||||
cea2.c.17582 | |||||||||
Expression_cluster (322) | |||||||||
Interaction (201) | |||||||||
Map_info | Map | III | Position | -0.468837 | Error | 0.001921 | |||
Positive | Positive_clone | C29E4 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00063976 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |