WormBase Tree Display for Gene: WBGene00002263
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WBGene00002263 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | lea-1 | |||||||
Sequence_name | K08H10.1 | ||||||||
Molecular_name (51) | |||||||||
Other_name | lea | Accession_evidence | EMBL | AF016513 | |||||
Ce-LEA | Paper_evidence | WBPaper00036159 | |||||||
CELE_K08H10.1 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | lea-1 | ||||||||
DB_info | Database | AceView | gene | 5K507 | |||||
WormQTL | gene | WBGene00002263 | |||||||
WormFlux | gene | WBGene00002263 | |||||||
NDB | locus_tag | CELE_K08H10.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00002263|UniProtKB=H2FLL1 | |||||||
family | PTHR47372 | ||||||||
NCBI | gene | 3564838 | |||||||
RefSeq | protein (17) | ||||||||
TREEFAM | TREEFAM_ID | TF350492 | |||||||
TrEMBL | UniProtAcc | A0A486WXP6 | |||||||
H2FLK7 | |||||||||
A0A486WUR9 | |||||||||
A0A486WWP8 | |||||||||
G5EFU3 | |||||||||
A0A486WVH0 | |||||||||
H2FLK9 | |||||||||
A0A486WVD1 | |||||||||
G5EBW6 | |||||||||
A0A486WTP6 | |||||||||
H2FLK5 | |||||||||
H2FLL1 | |||||||||
G5EEF0 | |||||||||
H2FLK3 | |||||||||
G5EDH9 | |||||||||
H2FLK8 | |||||||||
G5EGB8 | |||||||||
UniProt_GCRP | UniProtAcc | H2FLL1 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:27 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 21 Jan 2011 10:43:00 | WBPerson4025 | Event | Acquires_merge | WBGene00010695 | ||||
3 | 05 Dec 2011 16:53:32 | WBPerson4025 | Event | Acquires_merge | WBGene00010696 | ||||
Acquires_merge | WBGene00010695 | ||||||||
WBGene00010696 | |||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | lea | ||||||||
Allele (248) | |||||||||
Possibly_affected_by | WBVar02157816 | ||||||||
Strain | WBStrain00051752 | ||||||||
WBStrain00051749 | |||||||||
WBStrain00051753 | |||||||||
WBStrain00051748 | |||||||||
WBStrain00051751 | |||||||||
WBStrain00051750 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00010383 | ||||||||
00021339 | |||||||||
00021340 | |||||||||
00021341 | |||||||||
00110332 | |||||||||
00110333 | |||||||||
00110334 | |||||||||
00110335 | |||||||||
Contained_in_operon | CEOP5548 | ||||||||
Ortholog (42) | |||||||||
Structured_description | Concise_description | The lea-1 gene encodes a protein that is predicted to be hydrophilic and heat-resistant, and that might participate in anhydrobiosis. | Paper_evidence | WBPaper00013022 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable lipid binding activity. Involved in hyperosmotic response; response to desiccation; and response to heat. Predicted to be located in extracellular region. Expressed in several structures, including excretory cell; head; intestine; pharynx; and tail neurons. Is an ortholog of human PLIN4 (perilipin 4). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS (17) | ||||||||
Corresponding_CDS_history | K08H10.1e:wp275 | ||||||||
K08H10.1m:wp275 | |||||||||
K08H10.1n:wp275 | |||||||||
K08H10.1o:wp275 | |||||||||
K08H10.1p:wp261 | |||||||||
Corresponding_transcript (17) | |||||||||
Other_sequence (41) | |||||||||
Associated_feature (24) | |||||||||
Experimental_info | RNAi_result (16) | ||||||||
Expr_pattern (11) | |||||||||
Drives_construct | WBCnstr00011741 | ||||||||
WBCnstr00011742 | |||||||||
WBCnstr00031213 | |||||||||
WBCnstr00036348 | |||||||||
Construct_product | WBCnstr00031213 | ||||||||
WBCnstr00036348 | |||||||||
Microarray_results | SMD_K08H10.1 | ||||||||
SMD_K08H10.2 | |||||||||
SMD_K08H10.3 | |||||||||
172489_x_at | |||||||||
174552_s_at | |||||||||
174700_at | |||||||||
182767_at | |||||||||
184322_at | |||||||||
187999_at | |||||||||
A_12_P114575 | |||||||||
A_12_P114744 | |||||||||
A_12_P131190 | |||||||||
A_12_P147390 | |||||||||
Aff_K08H10.1 | |||||||||
Aff_K08H10.2 | |||||||||
Aff_K08H10.3 | |||||||||
GPL13394_WBGene00002263 | |||||||||
GPL13394_WBGene00010695 | |||||||||
GPL13394_WBGene00010696 | |||||||||
GPL13914_K08H10.1 | |||||||||
GPL13914_K08H10.2 | |||||||||
GPL13914_K08H10.3 | |||||||||
GPL14144_K08H10.1_1906-1965_0.931_4_A | |||||||||
GPL14144_K08H10.1_2041-2100_0.932_3_B | |||||||||
GPL14144_K08H10.1_2083-2142_0.930_5_C | |||||||||
GPL14144_K08H10.2b_850-909_0.905_11_A | |||||||||
GPL14144_K08H10.3a_102-161_0.937_2_B | |||||||||
GPL14144_K08H10.3a_168-227_0.946_1_A | |||||||||
GPL14144_K08H10.3a_79-138_0.936_3_C | |||||||||
GPL19516_CGZ0028684 | |||||||||
GPL19516_CGZ0028685 | |||||||||
GPL19516_CGZ0028686 | |||||||||
GPL19516_CGZ0028687 | |||||||||
GPL19516_CGZ0028688 | |||||||||
GPL19516_CGZ0028689 | |||||||||
GPL19516_CGZ0028690 | |||||||||
GPL19516_CGZ0028691 | |||||||||
GPL19516_CGZ0028692 | |||||||||
GPL19516_CGZ0028693 | |||||||||
GPL19516_CGZ0028694 | |||||||||
GPL19516_CGZ0028695 | |||||||||
GPL19516_CGZ0028696 | |||||||||
GPL19516_CGZ0028697 | |||||||||
GPL19516_CGZ0028698 | |||||||||
GPL19516_CGZ0028699 | |||||||||
GPL19516_CGZ0028700 | |||||||||
GPL19516_CGZ0028701 | |||||||||
GPL19516_CGZ0028702 | |||||||||
GPL19516_CGZ0028703 | |||||||||
GPL21109_K08H10.1a.1 | |||||||||
GPL21109_K08H10.1a.2 | |||||||||
GPL21109_K08H10.1b.1 | |||||||||
GPL3518_CE18875 | |||||||||
GPL3518_CE18876 | |||||||||
GPL3518_CE31359 | |||||||||
GPL8304_CE_WBGene00002263_A | |||||||||
GPL8304_CE_WBGene00002263_B | |||||||||
GPL8304_CE_WBGene00002263_C | |||||||||
GPL8304_CE_WBGene00010695_A | |||||||||
GPL8304_CE_WBGene00010695_B | |||||||||
GPL8673_K08H10_1P00727 | |||||||||
GPL8673_K08H10_1P01569 | |||||||||
GPL8673_K08H10_1P02101 | |||||||||
GPL8673_K08H10_2aP00145 | |||||||||
GPL8673_K08H10_2aP01001 | |||||||||
GPL8673_K08H10_2aP01121 | |||||||||
GPL8673_K08H10_2bP00289 | |||||||||
GPL8673_K08H10_2bP01296 | |||||||||
GPL8673_K08H10_2bP01434 | |||||||||
GPL8673_K08H10_3aP00001 | |||||||||
GPL8673_K08H10_3aP00007 | |||||||||
GPL8673_K08H10_3aP00012 | |||||||||
GPL8673_K08H10_3bP00035 | |||||||||
GPL8673_K08H10_3bP00131 | |||||||||
GPL8673_K08H10_3bP00151 | |||||||||
GPL9450_K08H10.1 | |||||||||
GPL9450_K08H10.2a | |||||||||
cea2.c.37261 | |||||||||
cea2.p.120908 | |||||||||
Expression_cluster (352) | |||||||||
SAGE_tag | SAGE:tttgctgaaa | Strand | Antisense | ||||||
SAGE:atactaagga | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:ttcctttgcagaatcga | Strand | Antisense | |||||||
SAGE:ttcctttgca | Strand | Antisense | |||||||
SAGE:ccaaaggaaa | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:atactaaggaagcagtt | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:ggagtcaactaaggaaa | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:gtgaagatgc | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:ggcagcttcc | Strand | Antisense | |||||||
SAGE:ccaaaggaaaaattgcc | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:gtgaagatgcgcaagaa | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
Interaction (28) | |||||||||
Map_info | Map | V | Position | 2.23388 | Error | 0.001124 | |||
Positive | Positive_clone | K08H10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (17) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |