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WormBase Tree Display for Gene: WBGene00014177

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Name Class

WBGene00014177SMapS_parentSequenceZK1010
IdentityVersion2
NameCGC_namefrg-1Person_evidenceWBPerson9558
Sequence_nameZK1010.3
Molecular_nameZK1010.3
ZK1010.3.1
CE37862
Other_nameCELE_ZK1010.3Accession_evidenceNDBBX284603
Public_namefrg-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:55WBPerson1971EventImportedInitial conversion from CDS class of WS125
207 May 2009 08:50:11WBPerson9133Name_changeCGC_namefrg-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfrg
Allele (17)
RNASeq_FPKMWBls:0000002 (82)
WBls:0000003 (11)
WBls:0000004 (45)
WBls:0000006294.15From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000006.Hermaphrodite.WBbt:0007833.SRP042619.SRX559705
RNASeq.elegans.WBStrain00000001.WBls:0000006.Hermaphrodite.WBbt:0007833.SRP042619.SRX559706
WBls:0000007 (11)
WBls:0000008104.46From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000008.Hermaphrodite.WBbt:0007833.SRP000401.SRX085220
178.454From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000008.Hermaphrodite.WBbt:0007833.SRP000401.SRX145480
25.9917From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000008.Hermaphrodite.WBbt:0007833.SRP000401.SRX085219
WBls:0000010 (15)
WBls:0000013 (11)
WBls:0000014 (19)
WBls:0000015 (24)
WBls:0000017121.126From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004015.SRP029448.SRX343304
149.403From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0003810.SRP029448.SRX343325
35.5403From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004458.SRP029448.SRX343278
42.7147From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004804.SRP029448.SRX343254
47.2554From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004458.SRP029448.SRX343277
47.3823From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004804.SRP029448.SRX343252
49.1954From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0008115.SRP029448.SRX343342
52.9495From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0003810.SRP029448.SRX343324
72.8685From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004804.SRP029448.SRX343253
75.7467From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004015.SRP029448.SRX343305
WBls:0000020 (16)
WBls:0000021 (16)
WBls:00000230.848576From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000023.Hermaphrodite.WBbt:0007833.SRP015688.SRX185639
WBls:0000024 (69)
WBls:0000027 (15)
WBls:000003110.2689From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX103276
16.1579From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX103273
18.2567From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX008139
19.4656From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX103274
22.088From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX103275
32.8576From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX103277
36.7916From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX047470
WBls:000003214.1389From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP000401.SRX103984
20.0771From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP000401.SRX103983
20.5118From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP000401.SRX103985
24.1247From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP058023.SRX1019179
24.2421From_analysisRNASeq.elegans.WBls:0000032.control_mean
RNASeq.elegans.WBls:0000032.control_median
24.3594From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP058023.SRX1019178
24.5684From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP000401.SRX008138
WBls:0000035 (31)
WBls:0000038 (79)
WBls:0000041 (31)
WBls:000005215.074From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX037199
20.3511From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX008140
24.0371From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103269
24.9863From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103280
26.6939From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103278
27.6245From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103272
27.7048From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103271
28.8484From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103281
33.8425From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103270
36.244From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103279
WBls:0000063 (103)
WBls:0000064 (14)
WBls:0000065 (16)
WBls:0000068105.195From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265365
108.778From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265364
109.069From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265360
115.691From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265363
117.87From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265361
92.5643From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265362
WBls:0000131176.242From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0006876.SRP029448.SRX343221
180.697From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0006771.SRP029448.SRX343225
193.259From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0006876.SRP029448.SRX343222
205.417From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0006876.SRP029448.SRX343223
226.038From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0004015.SRP029448.SRX343227
238.221From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0004015.SRP029448.SRX343229
265.437From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0004015.SRP029448.SRX343228
268.682From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0006771.SRP029448.SRX343226
368.058From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0004015.SRP029448.SRX343220
WBls:0000141345.252From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000141.Hermaphrodite.WBbt:0007833.SRP029448.SRX343161
WBls:0000151 (14)
WBls:0000171 (15)
WBls:0000181392.63From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000181.Hermaphrodite.WBbt:0007833.SRP029448.SRX343164
WBls:0000191468.101From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000191.Hermaphrodite.WBbt:0007833.SRP029448.SRX343165
WBls:0000201 (12)
WBls:0000221113.879From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0003810.SRP029448.SRX343314
121.459From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0004458.SRP029448.SRX343264
138.591From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0004015.SRP029448.SRX343291
194.125From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0004458.SRP029448.SRX343265
218.232From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0004015.SRP029448.SRX343290
218.719From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0008115.SRP029448.SRX343334
238.686From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0008115.SRP029448.SRX343333
65.2795From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0004804.SRP029448.SRX343241
84.2296From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0003810.SRP029448.SRX343315
87.7042From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0004458.SRP029448.SRX343266
WBls:0000231268.804From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000231.Hermaphrodite.WBbt:0007833.SRP029448.SRX343167
WBls:0000251108.602From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0004804.SRP029448.SRX343242
112.143From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0008115.SRP029448.SRX343336
139.359From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0004804.SRP029448.SRX343244
173.351From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0003810.SRP029448.SRX343317
203.095From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0008115.SRP029448.SRX343335
249.599From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0004458.SRP029448.SRX343268
275.135From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0007833.SRP029448.SRX343168
397.83From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0008115.SRP029448.SRX343337
405.595From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0004015.SRP029448.SRX343292
87.7134From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0004804.SRP029448.SRX343243
WBls:0000261246.949From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000261.Hermaphrodite.WBbt:0007833.SRP029448.SRX343169
WBls:0000281285.507From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000281.Hermaphrodite.WBbt:0007833.SRP029448.SRX343170
WBls:0000291 (13)
WBls:0000301289.051From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000301.Hermaphrodite.WBbt:0007833.SRP029448.SRX343172
WBls:0000311242.047From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000311.Hermaphrodite.WBbt:0007833.SRP029448.SRX343173
WBls:0000321136.908From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000321.Hermaphrodite.WBbt:0007833.SRP029448.SRX343174
WBls:0000331244.24From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000331.Hermaphrodite.WBbt:0007833.SRP029448.SRX343176
323.783From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000331.Hermaphrodite.WBbt:0007833.SRP029448.SRX343175
WBls:0000351191.706From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000351.Hermaphrodite.WBbt:0007833.SRP029448.SRX343178
217.344From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000351.Hermaphrodite.WBbt:0007833.SRP029448.SRX343179
WBls:0000361143.115From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000361.Hermaphrodite.WBbt:0007833.SRP029448.SRX343180
WBls:0000381101.638From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004804.SRP029448.SRX343249
147.253From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004804.SRP029448.SRX343250
165.641From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004458.SRP029448.SRX343274
176.588From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004804.SRP029448.SRX343248
184.288From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0003810.SRP029448.SRX343320
248.057From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004015.SRP029448.SRX343299
265.494From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004458.SRP029448.SRX343275
279.682From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004015.SRP029448.SRX343297
363.133From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0008115.SRP029448.SRX343340
WBls:0000391156.458From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000391.Hermaphrodite.WBbt:0007833.SRP029448.SRX343181
WBls:0000401116.329From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000401.Hermaphrodite.WBbt:0007833.SRP029448.SRX343182
WBls:0000421129.449From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000421.Hermaphrodite.WBbt:0007833.SRP029448.SRX343184
WBls:0000431174.726From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000431.Hermaphrodite.WBbt:0007833.SRP029448.SRX343185
WBls:0000451108.121From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000451.Hermaphrodite.WBbt:0007833.SRP029448.SRX343186
WBls:0000461102.907From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000461.Hermaphrodite.WBbt:0007833.SRP029448.SRX343187
WBls:0000471118.925From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0004804.SRP029448.SRX343251
181.993From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0008115.SRP029448.SRX343341
194.011From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0004015.SRP029448.SRX343300
194.83From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0004458.SRP029448.SRX343276
209.275From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0004015.SRP029448.SRX343301
54.9755From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0007833.SRP029448.SRX343189
92.5912From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0004015.SRP029448.SRX343302
WBls:000049191.9748From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000491.Hermaphrodite.WBbt:0007833.SRP029448.SRX343191
WBls:000050179.5323From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000501.Hermaphrodite.WBbt:0007833.SRP029448.SRX343192
WBls:000051175.2494From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000511.Hermaphrodite.WBbt:0007833.SRP029448.SRX343194
WBls:000052153.629From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000521.Hermaphrodite.WBbt:0007833.SRP029448.SRX343195
WBls:0000531127.312From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000531.Hermaphrodite.WBbt:0007833.SRP029448.SRX343197
97.4454From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000531.Hermaphrodite.WBbt:0007833.SRP029448.SRX343196
WBls:0000541112.266From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000541.Hermaphrodite.WBbt:0007833.SRP029448.SRX343199
60.1121From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000541.Hermaphrodite.WBbt:0007833.SRP029448.SRX343198
WBls:000055154.2262From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000551.Hermaphrodite.WBbt:0007833.SRP029448.SRX343200
WBls:0000561119.671From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000561.Hermaphrodite.WBbt:0007833.SRP029448.SRX343201
WBls:000058160.1727From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000581.Hermaphrodite.WBbt:0007833.SRP029448.SRX343202
WBls:000062190.7907From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000621.Hermaphrodite.WBbt:0007833.SRP029448.SRX343203
WBls:0000674101.148From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265367
108.935From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265371
115.949From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265370
141.313From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265369
179.739From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265366
97.803From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265368
WBls:0000676100.148From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000676.Hermaphrodite.WBbt:0007833.SRP021083.SRX265374
122.835From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000676.Hermaphrodite.WBbt:0007833.SRP021083.SRX265372
89.0077From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000676.Hermaphrodite.WBbt:0007833.SRP021083.SRX265373
89.6222From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000676.Hermaphrodite.WBbt:0007833.SRP021083.SRX265375
WBls:000069482.6379From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000694.Hermaphrodite.WBbt:0007833.SRP029448.SRX343205
WBls:000069519.1992From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000695.Hermaphrodite.WBbt:0007833.SRP029448.SRX343206
WBls:000069663.6526From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000696.Hermaphrodite.WBbt:0007833.SRP029448.SRX343207
WBls:000069757.0027From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000697.Hermaphrodite.WBbt:0007833.SRP029448.SRX343208
WBls:000069927.0797From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000699.Hermaphrodite.WBbt:0007833.SRP029448.SRX343210
WBls:000070058.1886From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000700.Hermaphrodite.WBbt:0007833.SRP029448.SRX343211
WBls:000070178.7641From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000701.Hermaphrodite.WBbt:0007833.SRP029448.SRX343212
WBls:000070272.1235From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000702.Hermaphrodite.WBbt:0007833.SRP029448.SRX343213
WBls:000070355.5864From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000703.Hermaphrodite.WBbt:0007833.SRP029448.SRX343214
GO_annotation (19)
Ortholog (37)
Structured_descriptionConcise_descriptionfrg-1 encodes the C. elegans ortholog of vertebrate facioscapulohumeral muscular dystrophy (FSHD) region gene 1 (FRG1); FRG-1 binds F-actin in vitro and, as a multimer, exhibits actin-bundling activity; FRG-1 is expressed throughout the life cycle; in embryos, FRG-1 localizes to nucleoli and diffusely in the cytoplasm; in larvae and adults, FRG-1 also localizes to dense bodies in body wall muscle, specifically to the distal region of the dense body where actin filaments attach; FRG-1 localization to the distal portion of dense bodies requires ATN-1/alpha-actinin activity; overexpression of FRG-1 under the control of its own promoter disrupts adult ventral body wall muscle integrity.Paper_evidenceWBPaper00036018
Curator_confirmedWBPerson1843
Date_last_updated11 Mar 2010 00:00:00
Automated_descriptionEnables actin filament binding activity and protein homodimerization activity. Involved in actin filament bundle assembly. Located in nucleolus and striated muscle dense body. Used to study facioscapulohumeral muscular dystrophy. Is an ortholog of human FRG1 (FSHD region gene 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoExperimental_modelDOID:11727Homo sapiensPaper_evidenceWBPaper00036018
Accession_evidenceOMIM158900
Curator_confirmedWBPerson324
Date_last_updated25 Feb 2013 00:00:00
Disease_relevanceChanges in the human FRG1 gene have been implicated in facioscapulohumeral muscular dystrophy (FSHD), an autosomal dominant myopathy typically characterized by progressive atrophy of muscles in the face, upper arms and shoulder girdle, with progression to the abdominal, pelvic girdle and foot extensor muscles in more severe cases; though the precise function of the FRG1 gene unknown, it has been characterized as a nuclear protein implicated in RNA biogenesis and has been associated with development of the vertebrate musculature and vasculature; studies in the C. elegans genetic model, from in vitro F-actin-bundling assays, indicate that both human FRG1 and elegans FRG-1 are actin-bundling proteins, and in elegans FRG-1 is both nuclear and cytoplasmic throughout development, appearing to concentrate in the nucleoli and dense bodies of body-wall muscle cells; when elegans FRG-1 is overexpressed, both the cytoplasmic and nuclear distributions are affected and ventral body wall muscle organization is disrupted; these studies indicate that FRG-1 is a multifunctional protein residing in distinct subcellular niches, primarily the nucleolus and the dense body, a plasma-membrane-bound muscle adhesion structure that attaches to the actin cytoskeleton; this data, along with studies from Xenopus, and mouse, support a model whereby increases in FRG1 in the muscle and associated tissues, contribute to FSHD pathology, potentially mediated by changes in the subcellular localization of FRG1.Homo sapiensPaper_evidenceWBPaper00036018
Accession_evidenceOMIM158900
601278
Curator_confirmedWBPerson324
Date_last_updated25 Feb 2013 00:00:00
Models_disease_in_annotationWBDOannot00000105
Molecular_infoCorresponding_CDSZK1010.3
Corresponding_CDS_historyZK1010.3:wp136
Corresponding_transcriptZK1010.3.1
Other_sequence (51)
Associated_featureWBsf645682
WBsf659672
WBsf659673
WBsf994774
WBsf994775
WBsf994776
WBsf1016290
WBsf1016291
WBsf1016292
WBsf225954
Experimental_infoRNAi_result (37)
Expr_patternExpr9003
Expr1026333
Expr1036350
Expr1162465
Expr2011878
Expr2030116
AntibodyWBAntibody00002120
Microarray_resultsSMD_ZK1010.3
187939_at
A_12_P111678
A_12_P159200
A_12_P159201
A_12_P159202
A_12_P159203
A_12_P159204
Aff_ZK1010.3
GPL13394_WBGene00014177
GPL13914_ZK1010.3
GPL14144_ZK1010.3_377-436_0.944_10_B
GPL14144_ZK1010.3_495-554_0.928_16_C
GPL14144_ZK1010.3_591-650_0.962_3_A
GPL19516_CGZ0056118
GPL19516_CGZ0056119
GPL21109_ZK1010.3.1
GPL3518_CE15499
GPL8304_CE_WBGene00014177_A
GPL8673_ZK1010_3P00566
GPL8673_ZK1010_3P00620
GPL8673_ZK1010_3P00674
GPL9450_ZK1010.3
cea2.p.83238
Expression_cluster (118)
Interaction (17)
Map_infoMapIIIPosition20.6995Error0.003872
PositivePositive_cloneZK1010Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00036018
WBPaper00038491
WBPaper00040494
WBPaper00041122
WBPaper00046849
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene