WormBase Tree Display for Gene: WBGene00012600

WBGene00012600 SMap: S_parent: Sequence: Y38E10A
  Identity: Version: 2
    Name: Sequence_name: Y38E10A.22
      Molecular_name: Y38E10A.22a
        Y38E10A.22a.1
        CE47846
        Y38E10A.22b
        CE35653
        Y38E10A.22c
        CE47962
        Y38E10A.22b.1
        Y38E10A.22c.1
      Other_name: CELE_Y38E10A.22 Accession_evidence: NDB BX284602
      Public_name: Y38E10A.22
    DB_info: Database: AceView gene 2M958
        WormQTL gene WBGene00012600
        WormFlux gene WBGene00012600
        NDB locus_tag CELE_Y38E10A.22
        Panther gene CAEEL|WormBase=WBGene00012600|UniProtKB=H2KMK6
          family PTHR19316
        NCBI gene 189667
        RefSeq protein NM_001267424.3
            NM_001267423.6
            NM_001267425.4
        TREEFAM TREEFAM_ID TF343318
        TrEMBL UniProtAcc E8MDV8
            Q9NAI9
            H2KMK6
        UniProt_GCRP UniProtAcc H2KMK6
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 17 Oct 2011 15:07:28 WBPerson1983 Event: Acquires_merge: WBGene00012601
      Acquires_merge: WBGene00012601
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (199)
    RNASeq_FPKM (74)
    GO_annotation: 00008412
      00008413
    Ortholog: WBGene00031746 Caenorhabditis briggsae From_analysis: OrthoMCL
            Inparanoid_8
      WBGene00059607 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00142997 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00160254 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00213079 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00113524 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00160606 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CSP26.g14926 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g15921 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g13111 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g16952 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g16039 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g14309 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g3922 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g3908 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Csp11.Scaffold629.g14954 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00647.g13979 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_02225.g25511 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_05595.g35267 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_12965.g40762 Caenorhabditis sinica From_analysis: WormBase-Compara
      chrII_pilon.g6237 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00211625 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable adenyl-nucleotide exchange factor activity. Predicted to be located in endoplasmic reticulum. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y38E10A.22a
      Y38E10A.22b
      Y38E10A.22c
    Corresponding_CDS_history: Y38E10A.22:wp109
      Y38E10A.22a:wp234
      Y38E10A.22c:wp234
    Corresponding_transcript: Y38E10A.22a.1
      Y38E10A.22b.1
      Y38E10A.22c.1
    Other_sequence: CRC01068_1
      CR02586
    Associated_feature: WBsf650664
      WBsf666262
      WBsf990171
      WBsf1013478
      WBsf224089
      WBsf224090
      WBsf224091
  Experimental_info: RNAi_result: WBRNAi00056022 Inferred_automatically: RNAi_primary
      WBRNAi00020289 Inferred_automatically: RNAi_primary
      WBRNAi00036845 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024621
      Expr1035572
      Expr1159541
      Expr2007302
      Expr2025535
    Microarray_results: SMD_Y38E10A.W
      SMD_Y38E10A.X
      187041_at
      187095_at
      A_12_P119017
      A_12_P119782
      GPL13394_WBGene00012601
      GPL13914_Y38E10A.23
      GPL14144_Y38E10A.22_117-176_0.632_149_A
      GPL14144_Y38E10A.22_38-97_0.615_155_C
      GPL14144_Y38E10A.22_83-142_0.887_13_B
      GPL14144_Y38E10A.23_273-332_0.867_3_C
      GPL14144_Y38E10A.23_387-446_0.923_1_A
      GPL14144_Y38E10A.23_67-126_0.901_2_B
      GPL19516_CGZ0044576
      GPL19516_CGZ0044577
      GPL19516_CGZ0044578
      GPL21109_Y38E10A.22a
      GPL21109_Y38E10A.22c
      GPL8304_CE_WBGene00012600_A
      GPL8304_CE_WBGene00012601_A
      GPL8673_Y38E10A_22P00004
      GPL8673_Y38E10A_22P00281
      GPL8673_Y38E10A_22P00555
      GPL8673_Y38E10A_23P00083
      GPL9450_Y38E10A.22
      cea2.p.49633
    Expression_cluster (127)
    Interaction: WBInteraction000539677
      WBInteraction000557819
      WBInteraction000559581
      WBInteraction000568036
      WBInteraction000568775
      WBInteraction000574129
      WBInteraction000574892
      WBInteraction000583847
      WBInteraction000584177
  Map_info: Positive: Positive_clone: Y38E10A Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 10.6818
  Method: Gene