WormBase Tree Display for Gene: WBGene00001991

WBGene00001991 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: C13G3
  Identity: Version: 2
    Name: CGC_name: hot-6 Person_evidence: WBPerson42
      Sequence_name: C13G3.2
      Molecular_name: C13G3.2
        C13G3.2.1
        CE05278
      Other_name: CELE_C13G3.2 Accession_evidence: NDB BX284605
      Public_name: hot-6
    DB_info: Database: AceView gene 5L502
        WormQTL gene WBGene00001991
        WormFlux gene WBGene00001991
        NDB locus_tag CELE_C13G3.2
        NCBI gene 179525
        RefSeq protein NM_073405.2
        TREEFAM TREEFAM_ID TF319227
        TrEMBL UniProtAcc G5EER8
        UniProt_GCRP UniProtAcc G5EER8
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:26 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 02 Mar 2018 10:40:20 WBPerson4025 Event: Split_into: WBGene00303040
      Split_into: WBGene00303040
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hot
    Allele (34)
    Strain: WBStrain00047574
    RNASeq_FPKM (74)
    GO_annotation: 00016782
    Ortholog: WBGene00072383 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00041498 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00136553 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00222439 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g975 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g9140 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g474 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g884 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17912 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g6025 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g6114 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g7932 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g23223 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g25367 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1032 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-hot-6 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold71.g449 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00426.g11218 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_12179 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_016529 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00086 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_50307600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00243611 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00270287 Strongyloides ratti From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C13G3.2
    Corresponding_CDS_history: C13G3.2a:wp264
      C13G3.2b:wp264
    Corresponding_transcript: C13G3.2.1
    Other_sequence: AF324058
    Associated_feature: WBsf653057
      WBsf1001250
      WBsf234485
  Experimental_info: RNAi_result: WBRNAi00028852 Inferred_automatically: RNAi_primary
      WBRNAi00040454 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1019438
      Expr1144520
      Expr2012544
      Expr2030783
    Drives_construct: WBCnstr00036535
    Construct_product: WBCnstr00036535
    Microarray_results: SMD_C13G3.2
      187955_at
      A_12_P100533
      Aff_C13G3.2
      GPL13394_WBGene00001991
      GPL13914_C13G3.2
      GPL14144_C13G3.2_445-504_0.945_3_A
      GPL19516_CGZ0004458
      GPL21109_C13G3.2
      GPL3518_CE05278
      GPL8304_CE_WBGene00001991_A
      GPL8673_C13G3_2P00086
      GPL8673_C13G3_2P00343
      GPL8673_C13G3_2P00405
      GPL9450_C13G3.2
      cea2.c.33863
    Expression_cluster (146)
    Interaction (14)
  Map_info: Map: V Position: 2.88673 Error: 0.003973
    Positive: Positive_clone: C13G3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00004498
  Remark: Sequence connection from [Chou JH, Bargmann CI, Sengupta P]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene