WormBase Tree Display for Gene: WBGene00001753

WBGene00001753 Evidence: Person_evidence: WBPerson1846
  SMap: S_parent: Sequence: R03D7
  Identity: Version: 1
    Name: CGC_name: gst-5
      Sequence_name: R03D7.6
      Molecular_name: R03D7.6a
        R03D7.6a.1
        CE01613
        R03D7.6c
        CE46291
        R03D7.6c.1
      Other_name: CELE_R03D7.6 Accession_evidence: NDB BX284602
      Public_name: gst-5
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:25 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gst
    Allele (30)
    Strain: WBStrain00032747
    RNASeq_FPKM (74)
    GO_annotation: 00008982
      00054968
      00054969
      00054970
      00054971
    Ortholog: WBGene00057515 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00039580 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00159052 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00152813 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00095888 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00099365 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00091237 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00099367 Pristionchus pacificus From_analysis: OMA
      CSP21.g549 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g17818 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g16793 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17154 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g10967 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP32.g10968 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP32.g10969 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g16042 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g16043 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g28313 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g28314 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g5078 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_II.g6567 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00184.g6520 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_05919 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_005868 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrII_pilon.g5850 Caenorhabditis elegans From_analysis: WormBase-Compara
      FB:FBgn0010226 Drosophila melanogaster From_analysis: OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-040426-2720 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoInspector
            SonicParanoid
      ZFIN:ZDB-GENE-070822-30 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoInspector
            SonicParanoid
      HGNC:17890 Homo sapiens From_analysis: OMA
            OrthoFinder
            Panther
            PhylomeDB
      MGI:1859384 Mus musculus From_analysis: OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      RGD:69251 Rattus norvegicus From_analysis: OMA
            OrthoFinder
            Panther
            PhylomeDB
    Paralog (45)
    Structured_description: Concise_description: gst-5 encodes a glutathione-S-transferase that inhibits CEP-1- and HUS-1-dependent germline apoptosis, as do BMK-1, RAD-50, and RAD-51. Paper_evidence: WBPaper00023909
          Curator_confirmed: WBPerson567
          Date_last_updated: 21 Apr 2007 00:00:00
      Automated_description: Predicted to enable glutathione transferase activity. Involved in innate immune response. Expressed in intestine and nerve ring. Is an ortholog of human HPGDS (hematopoietic prostaglandin D synthase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R03D7.6a
      R03D7.6c
    Corresponding_CDS_history: R03D7.6b:wp279
    Corresponding_transcript: R03D7.6a.1
      R03D7.6c.1
    Other_sequence (308)
    Associated_feature: WBsf019123
      WBsf019124
      WBsf019125
      WBsf019126
      WBsf644636
      WBsf222086
      WBsf222087
  Experimental_info: RNAi_result (11)
    Expr_pattern: Expr11598
      Expr1011457
      Expr1031044
      Expr1154882
      Expr2012329
      Expr2030566
    Drives_construct: WBCnstr00019079
      WBCnstr00036716
    Construct_product: WBCnstr00019079
      WBCnstr00036716
    Regulate_expr_cluster: WBPaper00024245:gst-5-binding_control
      WBPaper00024245:gst-5-binding_ROS-stressed
    Antibody: WBAntibody00001860
    Microarray_results: SMD_R03D7.6
      192820_at
      A_12_P115250
      Aff_R03D7.6
      GPL13394_WBGene00001753
      GPL13914_R03D7.6
      GPL14144_R03D7.6_216-275_0.876_30_C
      GPL14144_R03D7.6_240-299_0.944_4_A
      GPL14144_R03D7.6_61-120_0.934_9_B
      GPL19516_CGZ0030707
      GPL19516_CGZ0030708
      GPL19516_CGZ0030709
      GPL21109_R03D7.6a
      GPL21109_R03D7.6b
      GPL3518_CE01613
      GPL8304_CE_WBGene00001753_A
      GPL8673_R03D7_6P00053
      GPL8673_R03D7_6P00284
      GPL8673_R03D7_6P00300
      GPL9450_R03D7.6
      cea2.p.43984
    Expression_cluster (335)
    Interaction (36)
  Map_info: Map: II Position: 3.13385 Error: 0.000177
    Positive: Positive_clone: R03D7 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (22)
  Remark: [email fromJoanna Daulby]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene