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WormBase Tree Display for Gene: WBGene00039580

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Name Class

WBGene00039580SMapS_parentSequencecb25.fpc4206a
IdentityVersion2
NameCGC_nameCbr-gst-5From_analysisInferred_from_orthology
Sequence_nameCBG20632
Molecular_nameCBG20632
CBG20632.1
CBP04994
Other_nameCBG_20632Accession_evidenceNDBHE600991
Public_nameCbr-gst-5
DB_infoDatabaseNDBlocus_tagCBG_20632
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:09WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-gst-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgst
RNASeq_FPKMWBls:000000213.3472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
21.1642From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
24.155From_analysisRNASeq.briggsae.WBls:0000002.control_mean
37.9536From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
22.0146From_analysisRNASeq.briggsae.WBls:0000002.control_median
22.865From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
23.8325From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000313.8167From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
14.4296From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
15.0425From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
15.7529From_analysisRNASeq.briggsae.WBls:0000003.control_mean
18.3995From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000456.2866From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
60.8111From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
65.3356From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
53.4242From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
54.4462From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
57.5433From_analysisRNASeq.briggsae.WBls:0000004.control_mean
58.2237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.81239From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
22.887From_analysisRNASeq.briggsae.WBls:0000027.control_mean
58.4657From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
8.38289From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
11.4163From_analysisRNASeq.briggsae.WBls:0000027.control_median
14.4498From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
20.7777From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000357.82137From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.3292From_analysisRNASeq.briggsae.WBls:0000038.control_median
17.4119From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
21.9614From_analysisRNASeq.briggsae.WBls:0000038.control_mean
5.40915From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
57.778From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
7.24651From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004112.7921From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
13.0916From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
13.9347From_analysisRNASeq.briggsae.WBls:0000041.control_median
14.7779From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
18.7668From_analysisRNASeq.briggsae.WBls:0000041.control_mean
34.4056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
24.1291From_analysisRNASeq.briggsae.WBls:0000041.control_median
26.6092From_analysisRNASeq.briggsae.WBls:0000041.control_mean
33.4803From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
51.1077From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006321.4351From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
23.9187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
26.4577From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
28.3457From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
29.7281From_analysisRNASeq.briggsae.WBls:0000063.control_mean
48.4833From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
14.6566From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
25.1882From_analysisRNASeq.briggsae.WBls:0000063.control_median
27.2162From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010121.4351From_analysisRNASeq.briggsae.total_over_all_stages.control_median
34.6281From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
23.3918From_analysisRNASeq.briggsae.total_over_all_stages.control_median
34.8755From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (28)
Paralog (29)
Structured_descriptionAutomated_descriptionIs affected by Cbr-spr-4 based on RNA-seq studies. Is predicted to encode a protein with the following domains: Glutathione S-transferase, N-terminal; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain superfamily; Glutathione S-transferase, C-terminal; and Thioredoxin-like superfamily. Is an ortholog of C. elegans gst-5. In C. elegans, gst-5 is involved in innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG20632
Corresponding_CDS_historyCBG20632:bp194
Corresponding_transcriptCBG20632.1
Other_sequence (240)
Experimental_infoExpr_patternExpr1057063
Microarray_resultsGPL8303_CB6_WBGene00039580_A
GPL8303_CB6_WBGene00039580_B
GPL14143_CBG20632_70-129_0.827_34_B
GPL14143_CBG20632_191-250_0.882_6_C
GPL14143_CBG20632_247-306_0.871_14_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene