WormBase Tree Display for Gene: WBGene00044068

WBGene00044068 Evidence: Inferred_automatically: Gene name parsed from strain object: VC756
  SMap: S_parent: Sequence: ZK867
  Identity: Version: 5
    Name: CGC_name: syd-9 Paper_evidence: WBPaper00027711
      Sequence_name: ZK867.1
      Molecular_name (18)
      Other_name: tag-239 Person_evidence: WBPerson201
        ztf-10 Person_evidence: WBPerson1997
        CELE_ZK867.1 Accession_evidence: NDB BX284606
      Public_name: syd-9
    DB_info: Database: AceView gene XH845
        WormQTL gene WBGene00044068
        WormFlux gene WBGene00044068
        NDB locus_tag CELE_ZK867.1
        Panther gene CAEEL|WormBase=WBGene00044068|UniProtKB=Q95PV6
          family PTHR24409
        NCBI gene 180985
        RefSeq protein NM_076812.7
            NM_001375059.1
            NM_001392799.1
            NM_001375061.2
            NM_076813.8
        SwissProt UniProtAcc A0A5E4M3Q4
        TREEFAM TREEFAM_ID TF315770
        UniProt_GCRP UniProtAcc A0A5E4M3Q4
    Species: Caenorhabditis elegans
    History: Version_change: 1 22 Dec 2004 16:59:41 WBPerson2970 Event: Created
        2 16 Jun 2006 16:28:50 WBPerson2970 Name_change: CGC_name: ztf-10
                Other_name: tag-239
        3 09 Oct 2006 16:15:01 WBPerson2970 Name_change: Other_name: syd-9
        4 08 Nov 2006 16:37:11 WBPerson1847 Name_change: CGC_name: syd-9
                Other_name: ztf-10
        5 10 Jun 2014 12:12:12 WBPerson1983 Event: Acquires_merge: WBGene00022828
      Acquires_merge: WBGene00022828
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: syd
    Allele (184)
    Strain: WBStrain00036039
    RNASeq_FPKM (74)
    GO_annotation (12)
    Ortholog (18)
    Paralog (12)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Located in nuclear speck. Expressed in ASEL; ASER; muscle cell; nerve ring neurons; and neurons. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZK867.1b
      ZK867.1c
      ZK867.1d
      ZK867.1e
      ZK867.1f
    Corresponding_CDS_history: ZK867.1a:wp272
    Corresponding_transcript: ZK867.1b.1
      ZK867.1b.2
      ZK867.1b.3
      ZK867.1b.4
      ZK867.1c.1
      ZK867.1d.1
      ZK867.1e.1
      ZK867.1f.1
    Other_sequence (21)
    Associated_feature (28)
    Transcription_factor: WBTranscriptionFactor000497
  Experimental_info: RNAi_result (14)
    Expr_pattern (14)
    Drives_construct: WBCnstr00000606
      WBCnstr00012985
      WBCnstr00014268
      WBCnstr00014278
      WBCnstr00014314
      WBCnstr00014319
      WBCnstr00014323
      WBCnstr00014326
    Construct_product: WBCnstr00016822
      WBCnstr00016861
      WBCnstr00021935
    Antibody: WBAntibody00001114
      WBAntibody00001115
    Microarray_results (45)
    Expression_cluster (229)
    Interaction: WBInteraction000008824
      WBInteraction000008825
      WBInteraction000008826
      WBInteraction000008827
      WBInteraction000008828
      WBInteraction000028955
      WBInteraction000031395
      WBInteraction000203461
      WBInteraction000204083
      WBInteraction000218175
      WBInteraction000228731
      WBInteraction000255489
      WBInteraction000306549
      WBInteraction000332387
      WBInteraction000343800
      WBInteraction000346970
      WBInteraction000348556
      WBInteraction000379227
      WBInteraction000383705
      WBInteraction000396982
      WBInteraction000399314
      WBInteraction000404079
      WBInteraction000408619
      WBInteraction000421897
      WBInteraction000422296
      WBInteraction000441232
      WBInteraction000446867
      WBInteraction000451635
      WBInteraction000467353
      WBInteraction000468940
      WBInteraction000471258
      WBInteraction000474353
      WBInteraction000474869
      WBInteraction000505557
      WBInteraction000505572
      WBInteraction000508416
      WBInteraction000526664
      WBInteraction000527083
      WBInteraction000528384
      WBInteraction000529280
      WBInteraction000529454
      WBInteraction000529665
      WBInteraction000529749
      WBInteraction000529913
      WBInteraction000530037
      WBInteraction000530349
      WBInteraction000530881
      WBInteraction000531206
      WBInteraction000531248
      WBInteraction000531811
      WBInteraction000532714
      WBInteraction000533449
      WBInteraction000533463
      WBInteraction000533857
      WBInteraction000533982
      WBInteraction000534511
      WBInteraction000534519
      WBInteraction000546195
      WBInteraction000548770
      WBInteraction000551061
      WBInteraction000561552
      WBInteraction000574794
      WBInteraction000575915
  Map_info: Map: X Position: -1.79069 Error: 0.002604
    Positive: Positive_clone: ZK867 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point (3)
      Pos_neg_data: 10764
        10765
        10766
        10767
  Reference: WBPaper00027711
    WBPaper00032847
    WBPaper00038491
    WBPaper00041549
    WBPaper00061738
  Remark: [061108 ar2] This gene originally had syd-9 as an Other_name and ztf-10 as CGC_name. These were swapped on the publication by Wang(2006)
    [140610 pad] Gene was missing Acquires_merge Event history data so inferred from Acquires_merge tag.
  Method: Gene