WormBase Tree Display for Gene: WBGene00021948
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WBGene00021948 | SMap | S_parent | Sequence | Y55F3C | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | kvs-5 | Person_evidence | WBPerson260 | |||||
WBPerson145 | |||||||||
Sequence_name | Y55F3C.3 | ||||||||
Molecular_name (18) | |||||||||
Other_name | Y55F3C.f | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
Y55F3C.e | Curator_confirmed | WBPerson1983 | |||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_Y55F3C.3 | Accession_evidence | NDB | BX284604 | ||||||
Public_name | kvs-5 | ||||||||
DB_info | Database | AceView | gene | 4B505 | |||||
WormQTL | gene | WBGene00021948 | |||||||
WormFlux | gene | WBGene00021948 | |||||||
NDB | locus_tag | CELE_Y55F3C.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00021948|UniProtKB=U4PLR3 | |||||||
family | PTHR11537 | ||||||||
NCBI | gene | 176899 | |||||||
RefSeq | protein | NM_067577.8 | |||||||
NM_001307395.4 | |||||||||
NM_001307396.4 | |||||||||
NM_001307394.3 | |||||||||
NM_001307393.3 | |||||||||
NM_001307392.3 | |||||||||
TrEMBL | UniProtAcc | U4PE60 | |||||||
U4PR20 | |||||||||
U4PBB7 | |||||||||
U4PAX5 | |||||||||
Q95XV8 | |||||||||
U4PLR3 | |||||||||
UniProt_GCRP | UniProtAcc | U4PLR3 | |||||||
OMIM | gene | 600397 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 29 Jul 2011 16:30:08 | WBPerson2970 | Name_change | CGC_name | kvs-5 | ||||
3 | 04 Sep 2013 14:28:38 | WBPerson4025 | Event | Acquires_merge | WBGene00043706 | ||||
Acquires_merge | WBGene00043706 | ||||||||
Status | Live | ||||||||
Gene_info (9) | |||||||||
Disease_info | Potential_model | DOID:0080461 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6231) | ||||
DOID:1826 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6231) | ||||||
Molecular_info | Corresponding_CDS | Y55F3C.3a | |||||||
Y55F3C.3c | |||||||||
Y55F3C.3d | |||||||||
Y55F3C.3e | |||||||||
Y55F3C.3f | |||||||||
Y55F3C.3g | |||||||||
Corresponding_CDS_history | Y55F3C.3:wp175 | ||||||||
Y55F3C.3b:wp274 | |||||||||
Corresponding_transcript | Y55F3C.3a.1 | ||||||||
Y55F3C.3c.1 | |||||||||
Y55F3C.3d.1 | |||||||||
Y55F3C.3e.1 | |||||||||
Y55F3C.3f.1 | |||||||||
Y55F3C.3g.1 | |||||||||
Other_sequence (19) | |||||||||
Associated_feature (27) | |||||||||
Experimental_info | RNAi_result | WBRNAi00021056 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00002374 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00057555 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021057 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr9462 | ||||||||
Expr1016026 | |||||||||
Expr1017500 | |||||||||
Expr1039655 | |||||||||
Expr1160988 | |||||||||
Expr1160989 | |||||||||
Expr2012988 | |||||||||
Expr2031220 | |||||||||
Drives_construct | WBCnstr00024396 | ||||||||
Construct_product | WBCnstr00014027 | ||||||||
WBCnstr00024396 | |||||||||
Microarray_results (44) | |||||||||
Expression_cluster (195) | |||||||||
Interaction | WBInteraction000112836 | ||||||||
WBInteraction000112839 | |||||||||
WBInteraction000112840 | |||||||||
WBInteraction000162561 | |||||||||
WBInteraction000167519 | |||||||||
WBInteraction000170122 | |||||||||
WBInteraction000293558 | |||||||||
WBInteraction000469834 | |||||||||
WBInteraction000472696 | |||||||||
Map_info | Map | IV | Position | -23.571 | Error | 0.008513 | |||
Positive | Positive_clone | Y55F3C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038444 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00064898 | |||||||||
WBPaper00065331 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |