WormBase Tree Display for Gene: WBGene00020083
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| WBGene00020083 | SMap | S_parent | Sequence | R57 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R57.2 | |||||||
| Molecular_name | R57.2 | ||||||||
| R57.2.1 | |||||||||
| CE35753 | |||||||||
| Other_name | CELE_R57.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | R57.2 | ||||||||
| DB_info | Database | AceView | gene | XA917 | |||||
| WormQTL | gene | WBGene00020083 | |||||||
| WormFlux | gene | WBGene00020083 | |||||||
| NDB | locus_tag | CELE_R57.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020083|UniProtKB=P91405 | |||||||
| family | PTHR21679 | ||||||||
| NCBI | gene | 180385 | |||||||
| RefSeq | protein | NM_075683.3 | |||||||
| TREEFAM | TREEFAM_ID | TF315315 | |||||||
| TrEMBL | UniProtAcc | P91405 | |||||||
| UniProt_GCRP | UniProtAcc | P91405 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (35) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (26) | |||||||||
| Paralog | WBGene00008215 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00022033 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00302974 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in ADE sheath cell; hypodermis; and intestine based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; rrf-3; and eat-2 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by eighteen chemicals including methylmercury hydroxide; 1-methylnicotinamide; and manganese chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: DB module and Domain of unknown function DB. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R57.2 | |||||||
| Corresponding_CDS_history | R57.2:wp108 | ||||||||
| Corresponding_transcript | R57.2.1 | ||||||||
| Other_sequence (32) | |||||||||
| Associated_feature (4) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00034974 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052045 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014572 | ||||||||
| Expr1038723 | |||||||||
| Expr1155680 | |||||||||
| Expr2005682 | |||||||||
| Expr2023898 | |||||||||
| Drives_construct | WBCnstr00025381 | ||||||||
| Construct_product | WBCnstr00025381 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (191) | |||||||||
| Interaction | WBInteraction000134446 | ||||||||
| WBInteraction000136680 | |||||||||
| WBInteraction000138732 | |||||||||
| WBInteraction000161015 | |||||||||
| WBInteraction000166654 | |||||||||
| WBInteraction000172196 | |||||||||
| WBInteraction000196978 | |||||||||
| WBInteraction000197390 | |||||||||
| WBInteraction000216840 | |||||||||
| WBInteraction000219213 | |||||||||
| WBInteraction000219817 | |||||||||
| WBInteraction000222909 | |||||||||
| WBInteraction000231366 | |||||||||
| WBInteraction000262318 | |||||||||
| WBInteraction000274742 | |||||||||
| WBInteraction000284852 | |||||||||
| WBInteraction000295528 | |||||||||
| WBInteraction000301539 | |||||||||
| WBInteraction000318099 | |||||||||
| WBInteraction000340145 | |||||||||
| WBInteraction000369121 | |||||||||
| WBInteraction000369946 | |||||||||
| WBInteraction000386911 | |||||||||
| WBInteraction000394942 | |||||||||
| WBInteraction000399058 | |||||||||
| WBInteraction000399420 | |||||||||
| WBInteraction000401034 | |||||||||
| WBInteraction000408175 | |||||||||
| WBInteraction000418978 | |||||||||
| WBInteraction000424430 | |||||||||
| WBInteraction000433876 | |||||||||
| WBInteraction000503238 | |||||||||
| Map_info | Positive | Positive_clone | R57 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -20.1923 | |||||||
| Method | Gene |
