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WormBase Tree Display for Gene: WBGene00019803

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Name Class

WBGene00019803SMapS_parentSequenceCHROMOSOME_X
IdentityVersion1
NameSequence_namePDB1.1
Molecular_namePDB1.1a
PDB1.1a.1
CE31209
PDB1.1b
CE39603
PDB1.1c
CE39604
PDB1.1b.1
PDB1.1c.1
Other_nameCELE_PDB1.1Accession_evidenceNDBBX284606
Public_namePDB1.1
DB_infoDatabaseWormQTLgeneWBGene00019803
WormFluxgeneWBGene00019803
NDBlocus_tagCELE_PDB1.1
PanthergeneCAEEL|WormBase=WBGene00019803|UniProtKB=H2KZN1
familyPTHR43840
NCBIgene181016
RefSeqproteinNM_001047812.7
NM_001047811.2
NM_001047813.4
TREEFAMTREEFAM_IDTF317380
TrEMBLUniProtAccH2KZN1
Q2L6X4
Q2L6X5
UniProt_GCRPUniProtAccH2KZN1
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:02WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (43)
StrainWBStrain00032969
WBStrain00033006
RNASeq_FPKM (74)
GO_annotation (11)
Ortholog (25)
ParalogWBGene00010644Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018280Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00018948Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044481Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019841Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000393Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00006590Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011821Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00012712Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013668Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable monoatomic cation transmembrane transporter activity. Involved in innate immune response. Predicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPDB1.1a
PDB1.1b
PDB1.1c
Corresponding_CDS_historyPDB1.1:wp153
Corresponding_transcriptPDB1.1a.1
PDB1.1b.1
PDB1.1c.1
Other_sequence (13)
Associated_feature (3)
Experimental_infoRNAi_resultWBRNAi00070103Inferred_automaticallyRNAi_primary
WBRNAi00051083Inferred_automaticallyRNAi_primary
WBRNAi00017287Inferred_automaticallyRNAi_primary
WBRNAi00034505Inferred_automaticallyRNAi_primary
Expr_patternExpr1016981
Expr1038575
Expr1154794
Expr2005295
Expr2023515
Drives_constructWBCnstr00025587
Construct_productWBCnstr00025587
Microarray_results (32)
Expression_cluster (186)
InteractionWBInteraction000133713
WBInteraction000146946
WBInteraction000148213
WBInteraction000182659
WBInteraction000211086
WBInteraction000227341
WBInteraction000229649
WBInteraction000249252
WBInteraction000259347
WBInteraction000263918
WBInteraction000280744
WBInteraction000314957
WBInteraction000320087
WBInteraction000348084
WBInteraction000357321
WBInteraction000359141
WBInteraction000363486
WBInteraction000377541
WBInteraction000404123
WBInteraction000407394
WBInteraction000438744
WBInteraction000444638
WBInteraction000446809
WBInteraction000449945
WBInteraction000450792
WBInteraction000456590
WBInteraction000458678
WBInteraction000465272
WBInteraction000581117
Map_infoPositivePositive_clonePDB1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX-1.59696
MethodGene