WormBase Tree Display for Gene: WBGene00018236

WBGene00018236 SMap: S_parent: Sequence: F40F4
  Identity: Version: 2
    Name: CGC_name: fbxb-71 Person_evidence: WBPerson655
      Sequence_name: F40F4.1
      Molecular_name: F40F4.1
        F40F4.1.1
        CE51237
      Other_name: CELE_F40F4.1 Accession_evidence: NDB BX284606
      Public_name: fbxb-71
    DB_info: Database: AceView gene XD883
        WormQTL gene WBGene00018236
        WormFlux gene WBGene00018236
        NDB locus_tag CELE_F40F4.1
        Panther gene CAEEL|WormBase=WBGene00018236|UniProtKB=Q20225
          family PTHR22899
        NCBI gene 180618
        RefSeq protein NM_001322617.3
        TrEMBL UniProtAcc Q20225
        UniProt_GCRP UniProtAcc Q20225
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:00 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Dec 2005 17:22:20 WBPerson2970 Name_change: CGC_name: fbxb-71
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxb
    Allele (20)
    RNASeq_FPKM (74)
    Ortholog (30)
    Paralog (143)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including ABarpapaaa; ABplaaaaaa; ABplpaaaaa; ABplpaaapa; and amphid neurons based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and let-60 based on microarray; tiling array; and RNA-seq studies. Is affected by twelve chemicals including Mercuric Chloride; multi-walled carbon nanotube; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info (4)
  Experimental_info: RNAi_result: WBRNAi00014655 Inferred_automatically: RNAi_primary
      WBRNAi00032030 Inferred_automatically: RNAi_primary
      WBRNAi00046863 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1037852
      Expr1150730
      Expr2011673
      Expr2029912
    Drives_construct: WBCnstr00026676
    Construct_product: WBCnstr00026676
    Microarray_results (15)
    Expression_cluster (126)
    Interaction: WBInteraction000181736
      WBInteraction000182995
      WBInteraction000188483
      WBInteraction000197756
      WBInteraction000198755
      WBInteraction000203568
      WBInteraction000203718
      WBInteraction000204558
      WBInteraction000208052
      WBInteraction000208970
      WBInteraction000210140
      WBInteraction000210521
      WBInteraction000210726
      WBInteraction000211810
      WBInteraction000211975
      WBInteraction000213832
      WBInteraction000216199
      WBInteraction000220194
      WBInteraction000221258
      WBInteraction000221917
      WBInteraction000221922
      WBInteraction000223456
      WBInteraction000224067
      WBInteraction000224395
      WBInteraction000224714
      WBInteraction000225533
      WBInteraction000227305
      WBInteraction000228905
      WBInteraction000230313
      WBInteraction000231383
      WBInteraction000233517
      WBInteraction000234800
      WBInteraction000235349
      WBInteraction000237997
      WBInteraction000238549
      WBInteraction000238641
      WBInteraction000239428
      WBInteraction000239609
      WBInteraction000240303
      WBInteraction000241157
      WBInteraction000242741
      WBInteraction000246526
      WBInteraction000247247
      WBInteraction000252188
      WBInteraction000253829
      WBInteraction000257491
      WBInteraction000258149
      WBInteraction000260751
      WBInteraction000261145
      WBInteraction000261267
      WBInteraction000261518
      WBInteraction000262182
      WBInteraction000262405
      WBInteraction000263113
      WBInteraction000264208
      WBInteraction000266390
      WBInteraction000268039
      WBInteraction000268431
      WBInteraction000268838
      WBInteraction000269234
      WBInteraction000273468
      WBInteraction000273483
      WBInteraction000273596
      WBInteraction000275058
      WBInteraction000276927
      WBInteraction000277911
      WBInteraction000278309
      WBInteraction000279153
      WBInteraction000280107
      WBInteraction000282796
      WBInteraction000284136
      WBInteraction000289622
      WBInteraction000289982
      WBInteraction000290812
      WBInteraction000292667
      WBInteraction000292937
      WBInteraction000292975
      WBInteraction000295298
      WBInteraction000296051
      WBInteraction000296305
      WBInteraction000296359
      WBInteraction000296658
      WBInteraction000297857
      WBInteraction000297979
      WBInteraction000298123
      WBInteraction000299006
      WBInteraction000300706
      WBInteraction000300947
      WBInteraction000301059
      WBInteraction000301190
      WBInteraction000305481
      WBInteraction000305528
      WBInteraction000306943
      WBInteraction000308134
      WBInteraction000310028
      WBInteraction000310888
      WBInteraction000313205
      WBInteraction000316868
      WBInteraction000317484
      WBInteraction000318510
      WBInteraction000320228
      WBInteraction000320559
      WBInteraction000321252
      WBInteraction000326203
      WBInteraction000333281
      WBInteraction000336768
      WBInteraction000338687
      WBInteraction000339409
      WBInteraction000344755
      WBInteraction000345135
      WBInteraction000345998
      WBInteraction000346209
      WBInteraction000347497
      WBInteraction000348759
      WBInteraction000351275
      WBInteraction000353882
      WBInteraction000354010
      WBInteraction000354335
      WBInteraction000356332
      WBInteraction000357197
      WBInteraction000357992
      WBInteraction000358346
      WBInteraction000358622
      WBInteraction000358731
      WBInteraction000359748
      WBInteraction000362349
      WBInteraction000365329
      WBInteraction000369137
      WBInteraction000373074
      WBInteraction000373271
      WBInteraction000375592
      WBInteraction000375957
      WBInteraction000378408
      WBInteraction000380471
      WBInteraction000380960
      WBInteraction000392494
      WBInteraction000393578
      WBInteraction000396906
      WBInteraction000400051
      WBInteraction000400327
      WBInteraction000402591
      WBInteraction000407791
      WBInteraction000409812
      WBInteraction000411053
      WBInteraction000411077
      WBInteraction000411236
      WBInteraction000415123
      WBInteraction000415713
      WBInteraction000416085
      WBInteraction000420634
      WBInteraction000420681
      WBInteraction000420759
      WBInteraction000421493
      WBInteraction000423379
      WBInteraction000424298
      WBInteraction000429653
      WBInteraction000431014
      WBInteraction000434050
      WBInteraction000436871
      WBInteraction000439336
      WBInteraction000441442
      WBInteraction000442013
      WBInteraction000442527
      WBInteraction000443304
      WBInteraction000451085
      WBInteraction000451584
      WBInteraction000452853
      WBInteraction000457419
      WBInteraction000458247
      WBInteraction000461719
  Map_info: Map: X Position: -10.6338
    Positive: Positive_clone: F40F4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene