WormBase Tree Display for Gene: WBGene00017982
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WBGene00017982 | SMap | S_parent | Sequence | F32D1 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | hpo | ||||||
Allele (18) | |||||||
Strain | WBStrain00037472 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00027726 | ||||||
00027727 | |||||||
00027728 | |||||||
00123253 | |||||||
00123254 | |||||||
00123255 | |||||||
Contained_in_operon | CEOP5052 | ||||||
Ortholog (18) | |||||||
Paralog | WBGene00019880 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00022582 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Predicted to contribute to proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in proton motive force-driven mitochondrial ATP synthesis. Predicted to be located in mitochondrial inner membrane. Predicted to be part of mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1). Human ortholog(s) of this gene implicated in mitochondrial complex V (ATP synthase) deficiency nuclear type 3. Is an ortholog of human ATP5F1E (ATP synthase F1 subunit epsilon) and ATP5F1EP2 (ATP synthase F1 subunit epsilon pseudogene 2). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0060332 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:838) | ||
Molecular_info | Corresponding_CDS | F32D1.2 | |||||
Corresponding_transcript | F32D1.2.1 | ||||||
Other_sequence (21) | |||||||
Associated_feature | WBsf652566 | ||||||
WBsf233569 | |||||||
Experimental_info | RNAi_result (23) | ||||||
Expr_pattern | Expr1013457 | ||||||
Expr1037738 | |||||||
Expr1150007 | |||||||
Expr2012560 | |||||||
Expr2030797 | |||||||
Drives_construct | WBCnstr00026867 | ||||||
Construct_product | WBCnstr00026867 | ||||||
Microarray_results (20) | |||||||
Expression_cluster (115) | |||||||
Interaction | WBInteraction000008398 | ||||||
WBInteraction000008399 | |||||||
WBInteraction000008400 | |||||||
WBInteraction000008401 | |||||||
WBInteraction000037062 | |||||||
WBInteraction000151571 | |||||||
WBInteraction000208867 | |||||||
WBInteraction000212163 | |||||||
WBInteraction000251315 | |||||||
WBInteraction000257530 | |||||||
WBInteraction000280434 | |||||||
WBInteraction000283332 | |||||||
WBInteraction000306256 | |||||||
WBInteraction000308733 | |||||||
WBInteraction000311583 | |||||||
WBInteraction000330143 | |||||||
WBInteraction000331927 | |||||||
WBInteraction000348582 | |||||||
WBInteraction000387085 | |||||||
WBInteraction000391749 | |||||||
WBInteraction000416305 | |||||||
WBInteraction000431730 | |||||||
WBInteraction000536368 | |||||||
WBInteraction000536381 | |||||||
WBInteraction000536395 | |||||||
WBInteraction000537148 | |||||||
WBInteraction000539676 | |||||||
WBInteraction000554006 | |||||||
WBInteraction000566397 | |||||||
WBInteraction000566676 | |||||||
WBInteraction000569370 | |||||||
WBInteraction000572238 | |||||||
WBInteraction000578094 | |||||||
WBInteraction000578539 | |||||||
WBInteraction000583433 | |||||||
Map_info | Map | V | Position | -5.88245 | Error | 0.011872 | |
Positive | Positive_clone | F32D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00028999 | ||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00060452 | |||||||
WBPaper00061870 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |