WormBase Tree Display for Gene: WBGene00016409
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WBGene00016409 | SMap | S_parent | Sequence | C34E10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | sumv-1 | Person_evidence | WBPerson2627 | |||||
Sequence_name | C34E10.8 | ||||||||
Molecular_name | C34E10.8 | ||||||||
C34E10.8.1 | |||||||||
CE32158 | |||||||||
Other_name | CELE_C34E10.8 | Accession_evidence | NDB | BX284603 | |||||
Public_name | sumv-1 | ||||||||
DB_info | Database | AceView | gene | 3G340 | |||||
WormQTL | gene | WBGene00016409 | |||||||
WormFlux | gene | WBGene00016409 | |||||||
NDB | locus_tag | CELE_C34E10.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016409|UniProtKB=P46582 | |||||||
family | PTHR16198 | ||||||||
NCBI | gene | 175720 | |||||||
RefSeq | protein | NM_065715.5 | |||||||
SwissProt | UniProtAcc | P46582 | |||||||
UniProt_GCRP | UniProtAcc | P46582 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 09 Jul 2014 14:33:57 | WBPerson2970 | Name_change | CGC_name | sumv-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | sumv | ||||||||
Allele (69) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00046565 | ||||||||
00046566 | |||||||||
00046567 | |||||||||
00046568 | |||||||||
00046569 | |||||||||
00046570 | |||||||||
00046571 | |||||||||
00046572 | |||||||||
00046573 | |||||||||
00046574 | |||||||||
Ortholog (21) | |||||||||
Structured_description | Concise_description | sumv-1 encodes a protein with similarity to the KAT8 NLS2 non-enzymatic subunit of the mammalian KAT8/MOF histone acetyltransferase complex. | Paper_evidence | WBPaper00045315 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 08 Jul 2014 00:00:00 | ||||||||
Automated_description | Located in cytoplasm; neuron projection; and nucleus. Expressed in hypodermis and neurons. Is an ortholog of human INO80D (INO80 complex subunit D). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C34E10.8 | |||||||
Corresponding_CDS_history | C34E10.8:wp88 | ||||||||
Corresponding_transcript | C34E10.8.1 | ||||||||
Other_sequence | ES739855.1 | ||||||||
CR04508 | |||||||||
CRC02127_1 | |||||||||
HBC22931_1 | |||||||||
Associated_feature | WBsf651040 | ||||||||
WBsf992342 | |||||||||
WBsf992343 | |||||||||
WBsf992344 | |||||||||
WBsf992345 | |||||||||
WBsf1014859 | |||||||||
WBsf1014860 | |||||||||
WBsf226654 | |||||||||
WBsf226655 | |||||||||
Experimental_info | RNAi_result (13) | ||||||||
Expr_pattern | Expr11826 | ||||||||
Expr1021985 | |||||||||
Expr1037031 | |||||||||
Expr1145905 | |||||||||
Expr2017120 | |||||||||
Expr2035256 | |||||||||
Drives_construct | WBCnstr00019481 | ||||||||
WBCnstr00028093 | |||||||||
Construct_product | WBCnstr00019481 | ||||||||
WBCnstr00028093 | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (126) | |||||||||
Interaction | WBInteraction000007583 | ||||||||
WBInteraction000051581 | |||||||||
WBInteraction000051614 | |||||||||
WBInteraction000051644 | |||||||||
WBInteraction000051674 | |||||||||
WBInteraction000218249 | |||||||||
WBInteraction000229362 | |||||||||
WBInteraction000244629 | |||||||||
WBInteraction000271867 | |||||||||
WBInteraction000287180 | |||||||||
WBInteraction000299474 | |||||||||
WBInteraction000319133 | |||||||||
WBInteraction000324286 | |||||||||
WBInteraction000324508 | |||||||||
WBInteraction000348892 | |||||||||
WBInteraction000353622 | |||||||||
WBInteraction000385049 | |||||||||
WBInteraction000389060 | |||||||||
WBInteraction000398192 | |||||||||
WBInteraction000409317 | |||||||||
WBInteraction000425460 | |||||||||
WBInteraction000428373 | |||||||||
WBInteraction000437232 | |||||||||
WBInteraction000438857 | |||||||||
WBInteraction000449859 | |||||||||
WBInteraction000462601 | |||||||||
WBInteraction000521947 | |||||||||
WBInteraction000521948 | |||||||||
WBInteraction000521950 | |||||||||
WBInteraction000523931 | |||||||||
WBInteraction000546142 | |||||||||
WBInteraction000546249 | |||||||||
WBInteraction000547438 | |||||||||
WBInteraction000550697 | |||||||||
WBInteraction000564606 | |||||||||
WBInteraction000564826 | |||||||||
WBInteraction000575472 | |||||||||
WBInteraction000582648 | |||||||||
Map_info | Map | III | Position | -1.85641 | |||||
Positive | Positive_clone | C34E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00027634 | ||||||||
WBPaper00045315 | |||||||||
WBPaper00048821 | |||||||||
WBPaper00065308 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |