WormBase Tree Display for Gene: WBGene00004481

WBGene00004481 SMap: S_parent: Sequence: F54E7
  Identity: Version: 1
    Name: CGC_name: rps-12
      Sequence_name: F54E7.2
      Molecular_name: F54E7.2
        F54E7.2.1
        CE26896
        F54E7.2.2
        F54E7.2.3
        F54E7.2.4
      Other_name: CELE_F54E7.2 Accession_evidence: NDB BX284603
      Public_name: rps-12
    DB_info: Database: AceView gene 3G769
        WormQTL gene WBGene00004481
        WormFlux gene WBGene00004481
        NDB locus_tag CELE_F54E7.2
        Panther gene CAEEL|WormBase=WBGene00004481|UniProtKB=P49196
          family PTHR11843
        NCBI gene 175786
        RefSeq protein NM_065820.8
        SwissProt UniProtAcc P49196
        TREEFAM TREEFAM_ID TF300196
        UniProt_GCRP UniProtAcc P49196
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:35 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rps
    Allele (21)
    Legacy_information: Orthologous to yeast (S.cerevisiae) ribosomal protein rps12 using blastP
    RNASeq_FPKM (72)
    GO_annotation (11)
    Contained_in_operon: CEOP3316
    Ortholog (39)
    Structured_description: Concise_description: rps-12 encodes a small ribosomal subunit S12 protein; by homology, RPS-12 is predicted to function in protein biosynthesis; in C. elegans, RPS-12 activity is required for embryonic and germline development, normal movement, and the overall health of the animal. Paper_evidence: WBPaper00004403
            WBPaper00005654
          Curator_confirmed: WBPerson1843
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in ribosomal small subunit biogenesis. Predicted to be located in nucleolus and ribosome. Predicted to be part of cytosolic small ribosomal subunit and small-subunit processome. Is an ortholog of human RPS12 (ribosomal protein S12). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F54E7.2
    Corresponding_transcript: F54E7.2.1
      F54E7.2.2
      F54E7.2.3
      F54E7.2.4
    Other_sequence (261)
    Associated_feature: WBsf645194
      WBsf645195
      WBsf658981
      WBsf981484
      WBsf1014935
      WBsf224977
  Experimental_info: RNAi_result (21)
    Expr_pattern (5)
    Drives_construct: WBCnstr00035452
    Construct_product: WBCnstr00035452
    Microarray_results (20)
    Expression_cluster (178)
    Interaction: WBInteraction000006449
      WBInteraction000006478
      WBInteraction000007206
      WBInteraction000101964
      WBInteraction000104578
      WBInteraction000106152
      WBInteraction000108299
      WBInteraction000108329
      WBInteraction000108344
      WBInteraction000108363
      WBInteraction000108375
      WBInteraction000108393
      WBInteraction000108410
      WBInteraction000108418
      WBInteraction000108419
      WBInteraction000108420
      WBInteraction000108421
      WBInteraction000108422
      WBInteraction000108423
      WBInteraction000108424
      WBInteraction000108425
      WBInteraction000108426
      WBInteraction000108427
      WBInteraction000108428
      WBInteraction000108429
      WBInteraction000108430
      WBInteraction000108431
      WBInteraction000108439
      WBInteraction000108454
      WBInteraction000108469
      WBInteraction000108511
      WBInteraction000108538
      WBInteraction000108577
      WBInteraction000108616
      WBInteraction000108643
      WBInteraction000109406
      WBInteraction000112856
      WBInteraction000114630
      WBInteraction000114975
      WBInteraction000115945
      WBInteraction000116343
      WBInteraction000118300
      WBInteraction000118368
      WBInteraction000119776
      WBInteraction000119782
      WBInteraction000119855
      WBInteraction000120967
      WBInteraction000125073
      WBInteraction000126877
      WBInteraction000126904
      WBInteraction000127988
      WBInteraction000128040
      WBInteraction000128100
      WBInteraction000128135
      WBInteraction000128168
      WBInteraction000128202
      WBInteraction000128463
      WBInteraction000128987
      WBInteraction000129012
      WBInteraction000129024
      WBInteraction000129040
      WBInteraction000129052
      WBInteraction000129061
      WBInteraction000129074
      WBInteraction000129087
      WBInteraction000129119
      WBInteraction000129136
      WBInteraction000129151
      WBInteraction000129169
      WBInteraction000129209
      WBInteraction000129222
      WBInteraction000129232
      WBInteraction000129265
      WBInteraction000129338
      WBInteraction000129361
      WBInteraction000129399
      WBInteraction000129429
      WBInteraction000129691
      WBInteraction000129692
      WBInteraction000129693
      WBInteraction000129694
      WBInteraction000129695
      WBInteraction000129696
      WBInteraction000129697
      WBInteraction000129698
      WBInteraction000129699
      WBInteraction000129700
      WBInteraction000129701
      WBInteraction000129702
      WBInteraction000129703
      WBInteraction000129704
      WBInteraction000129705
      WBInteraction000129706
      WBInteraction000129707
      WBInteraction000129708
      WBInteraction000129709
      WBInteraction000129710
      WBInteraction000129711
      WBInteraction000129712
      WBInteraction000129713
      WBInteraction000129714
      WBInteraction000129715
      WBInteraction000129716
      WBInteraction000129717
      WBInteraction000129718
      WBInteraction000133817
      WBInteraction000135047
      WBInteraction000135078
      WBInteraction000135316
      WBInteraction000147389
      WBInteraction000154349
      WBInteraction000155036
      WBInteraction000155037
      WBInteraction000155038
      WBInteraction000155347
      WBInteraction000155410
      WBInteraction000183359
      WBInteraction000186162
      WBInteraction000186163
      WBInteraction000205439
      WBInteraction000205440
      WBInteraction000209314
      WBInteraction000212615
      WBInteraction000212617
      WBInteraction000222859
      WBInteraction000223048
      WBInteraction000230144
      WBInteraction000238705
      WBInteraction000241989
      WBInteraction000242602
      WBInteraction000254102
      WBInteraction000287439
      WBInteraction000330112
      WBInteraction000338189
      WBInteraction000350142
      WBInteraction000366622
      WBInteraction000390512
      WBInteraction000396638
      WBInteraction000404504
      WBInteraction000406410
      WBInteraction000441580
      WBInteraction000441581
      WBInteraction000441695
      WBInteraction000455295
      WBInteraction000462568
      WBInteraction000463540
      WBInteraction000466948
      WBInteraction000467677
      WBInteraction000472271
      WBInteraction000540935
      WBInteraction000541949
      WBInteraction000543354
      WBInteraction000555891
      WBInteraction000561827
      WBInteraction000562185
      WBInteraction000562403
      WBInteraction000562763
      WBInteraction000565636
      WBInteraction000565832
      WBInteraction000565921
      WBInteraction000567273
      WBInteraction000567502
      WBInteraction000569250
      WBInteraction000570324
      WBInteraction000571101
      WBInteraction000572143
      WBInteraction000572513
      WBInteraction000572863
      WBInteraction000573565
      WBInteraction000574467
      WBInteraction000575692
      WBInteraction000575953
      WBInteraction000577392
      WBInteraction000577747
      WBInteraction000580356
      WBInteraction000584544
      WBInteraction000585413
      WBInteraction000586097
  Map_info: Map: III Position: -1.45858 Error: 0.000827
    Positive: Positive_clone: F54E7 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00024230
    WBPaper00028564
    WBPaper00029197
    WBPaper00038356
    WBPaper00038491
    WBPaper00049828
    WBPaper00055090
    WBPaper00065012
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene