WormBase Tree Display for Gene: WBGene00003469

WBGene00003469 SMap: S_parent: Sequence: K05F1
  Identity: Version: 1
    Name: CGC_name: msp-142 Person_evidence: WBPerson680
      Sequence_name: K05F1.2
      Molecular_name: K05F1.2
        K05F1.2.1
        CE02806
      Other_name: CELE_K05F1.2 Accession_evidence: NDB BX284602
      Public_name: msp-142
    DB_info: Database: AceView gene 2G89
        WormQTL gene WBGene00003469
        WormFlux gene WBGene00003469
        NDB locus_tag CELE_K05F1.2
        NCBI gene 173981
        RefSeq protein NM_062743.6
        SwissProt UniProtAcc P53017
        UniProt_GCRP UniProtAcc P53017
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:32 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: msp
    Allele (14)
    Legacy_information: Cluster of two genes four pseudogenes including msp-142 (transcribed).
      [C.elegansII] NMK. Encodes MSP (16kD). Defines cluster of two genes, four pseudogenes including msp-142 (transcribed). [Ward et al. (1988); BA]
    RNASeq_FPKM (74)
    Ortholog (34)
    Paralog (49)
    Structured_description: Concise_description: msp-142 encodes a protein that belongs to a family of proteins called the Major Sperm Proteins (MSPs) that is conserved in nematodes; this family consists of closely related, small, basic proteins that make up 15% of sperm protein; this multigene family consists of over fifty genes, including many pseudogenes; MSPs are involved in both extracellular signaling and cytoskeletal functions during reproduction-MSP antagonizes Eph/ephrin signaling, in part, by binding VAB-1 Eph receptor tyrosine kinase on oocytes and sheath cells to promote oocyte maturation and MAPK activation; MSPs assemble into fibrous networks that drive movement of the C. elegans sperm; msp genes are expressed only in late primary spermatocytes. Paper_evidence: WBPaper00001023
            WBPaper00002143
            WBPaper00004591
            WBPaper00005670
          Curator_confirmed: WBPerson324
          Date_last_updated: 31 Mar 2005 00:00:00
      Automated_description: Expressed in gonad; oocyte; and sperm. Is predicted to encode a protein with the following domains: Major sperm protein (MSP) domain; MSP (Major sperm protein) domain; PapD-like superfamily; and Immunoglobulin-like fold. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K05F1.2
    Corresponding_transcript: K05F1.2.1
    Other_sequence (355)
    Associated_feature: WBsf221344
  Experimental_info: RNAi_result: WBRNAi00033989 Inferred_automatically: RNAi_primary
      WBRNAi00049989 Inferred_automatically: RNAi_primary
      WBRNAi00059194 Inferred_automatically: RNAi_primary
      WBRNAi00021849 Inferred_automatically: RNAi_primary
      WBRNAi00059192 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr3417
      Expr1022410
      Expr1153684
      Expr2013770
      Expr2032006
    Drives_construct: WBCnstr00036098
    Construct_product: WBCnstr00005246
      WBCnstr00022850
      WBCnstr00036098
    Antibody: WBAntibody00000037
      WBAntibody00000038
      WBAntibody00000854
      WBAntibody00000855
      WBAntibody00000856
      WBAntibody00000857
      WBAntibody00000858
    Microarray_results (15)
    Expression_cluster (229)
    Interaction: WBInteraction000100911
      WBInteraction000101680
      WBInteraction000101976
      WBInteraction000102266
      WBInteraction000102830
      WBInteraction000102889
      WBInteraction000103111
      WBInteraction000103309
      WBInteraction000103328
      WBInteraction000103329
      WBInteraction000103381
      WBInteraction000103439
      WBInteraction000103723
      WBInteraction000103767
      WBInteraction000103918
      WBInteraction000104526
      WBInteraction000104610
      WBInteraction000105006
      WBInteraction000105162
      WBInteraction000105297
      WBInteraction000106088
      WBInteraction000107262
      WBInteraction000109225
      WBInteraction000109621
      WBInteraction000110629
      WBInteraction000110716
      WBInteraction000110888
      WBInteraction000111227
      WBInteraction000111325
      WBInteraction000114675
      WBInteraction000114682
      WBInteraction000114933
      WBInteraction000115445
      WBInteraction000115758
      WBInteraction000116205
      WBInteraction000117609
      WBInteraction000119283
      WBInteraction000120367
      WBInteraction000120890
      WBInteraction000120897
      WBInteraction000122422
      WBInteraction000124069
      WBInteraction000125017
      WBInteraction000126853
      WBInteraction000127032
      WBInteraction000133187
      WBInteraction000136549
      WBInteraction000137328
      WBInteraction000138360
      WBInteraction000139206
      WBInteraction000139400
      WBInteraction000140415
      WBInteraction000140491
      WBInteraction000141893
      WBInteraction000143056
      WBInteraction000143380
      WBInteraction000144544
      WBInteraction000144944
      WBInteraction000144997
      WBInteraction000145528
      WBInteraction000145881
      WBInteraction000147517
      WBInteraction000149056
      WBInteraction000149629
      WBInteraction000153143
      WBInteraction000162047
      WBInteraction000162693
      WBInteraction000163263
      WBInteraction000163269
      WBInteraction000163452
      WBInteraction000170919
      WBInteraction000171552
      WBInteraction000171660
      WBInteraction000171815
      WBInteraction000171972
      WBInteraction000172781
      WBInteraction000176314
      WBInteraction000177310
      WBInteraction000177666
      WBInteraction000179947
      WBInteraction000182780
      WBInteraction000183381
      WBInteraction000189975
      WBInteraction000191172
      WBInteraction000192456
      WBInteraction000193403
      WBInteraction000194075
      WBInteraction000196979
      WBInteraction000197123
      WBInteraction000197927
      WBInteraction000198453
      WBInteraction000199135
      WBInteraction000201643
      WBInteraction000201714
      WBInteraction000204044
      WBInteraction000204288
      WBInteraction000207562
      WBInteraction000207975
      WBInteraction000209540
      WBInteraction000209737
      WBInteraction000210411
      WBInteraction000211437
      WBInteraction000211799
      WBInteraction000212305
      WBInteraction000214582
      WBInteraction000219239
      WBInteraction000220074
      WBInteraction000223443
      WBInteraction000223498
      WBInteraction000227181
      WBInteraction000234661
      WBInteraction000236122
      WBInteraction000236185
      WBInteraction000238944
      WBInteraction000247577
      WBInteraction000250698
      WBInteraction000254960
      WBInteraction000254992
      WBInteraction000261927
      WBInteraction000266044
      WBInteraction000269880
      WBInteraction000270455
      WBInteraction000273687
      WBInteraction000274613
      WBInteraction000277406
      WBInteraction000278853
      WBInteraction000280830
      WBInteraction000291674
      WBInteraction000292397
      WBInteraction000293822
      WBInteraction000296395
      WBInteraction000303183
      WBInteraction000303701
      WBInteraction000308349
      WBInteraction000309649
      WBInteraction000311353
      WBInteraction000311434
      WBInteraction000317807
      WBInteraction000333794
      WBInteraction000334544
      WBInteraction000335515
      WBInteraction000337176
      WBInteraction000346558
      WBInteraction000350804
      WBInteraction000354519
      WBInteraction000355727
      WBInteraction000356918
      WBInteraction000360371
      WBInteraction000364989
      WBInteraction000365960
      WBInteraction000368401
      WBInteraction000370913
      WBInteraction000374478
      WBInteraction000374776
      WBInteraction000375271
      WBInteraction000376188
      WBInteraction000377787
      WBInteraction000387277
      WBInteraction000392238
      WBInteraction000398570
      WBInteraction000403405
      WBInteraction000406116
      WBInteraction000411482
      WBInteraction000411639
      WBInteraction000412213
      WBInteraction000412601
      WBInteraction000413525
      WBInteraction000415364
      WBInteraction000416189
      WBInteraction000420825
      WBInteraction000421019
      WBInteraction000421277
      WBInteraction000422276
      WBInteraction000423017
      WBInteraction000425251
      WBInteraction000427190
      WBInteraction000427841
      WBInteraction000432408
      WBInteraction000433467
      WBInteraction000433734
      WBInteraction000434563
      WBInteraction000436851
      WBInteraction000439156
      WBInteraction000440454
      WBInteraction000441229
      WBInteraction000441895
      WBInteraction000442414
      WBInteraction000442641
      WBInteraction000443956
      WBInteraction000445231
      WBInteraction000447332
      WBInteraction000453571
      WBInteraction000454591
      WBInteraction000456644
      WBInteraction000459611
      WBInteraction000462344
      WBInteraction000560571
      WBInteraction000560572
      WBInteraction000560582
      WBInteraction000560593
  Map_info: Map: II Position: -0.923359 Error: 0.001298
    Positive: Positive_clone (2)
    Pseudo_map_position
  Reference: WBPaper00001023
    WBPaper00001024
    WBPaper00001209
    WBPaper00003113
    WBPaper00004591
    WBPaper00015440
    WBPaper00024312
    WBPaper00032220
    WBPaper00064850
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene