WormBase Tree Display for Gene: WBGene00001998
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| WBGene00001998 | SMap | S_parent | Sequence | F32A11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | hpr-17 | |||||||
| Sequence_name | F32A11.2 | ||||||||
| Molecular_name | F32A11.2 | ||||||||
| F32A11.2.1 | |||||||||
| CE17738 | |||||||||
| Other_name | CELE_F32A11.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | hpr-17 | ||||||||
| DB_info | Database | AceView | gene | 2N444 | |||||
| WormQTL | gene | WBGene00001998 | |||||||
| WormFlux | gene | WBGene00001998 | |||||||
| NDB | locus_tag | CELE_F32A11.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001998|UniProtKB=G5EGG2 | |||||||
| family | PTHR12172 | ||||||||
| NCBI | gene | 174958 | |||||||
| RefSeq | protein | NM_064392.7 | |||||||
| TrEMBL | UniProtAcc | G5EGG2 | |||||||
| UniProt_GCRP | UniProtAcc | G5EGG2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hpr | ||||||||
| Allele (124) | |||||||||
| Strain | WBStrain00040708 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (36) | |||||||||
| Structured_description | Concise_description | hpr-17 encodes the C. elegans homolog of the S. pombe Rad17p and S. cerevisiae Rad24p DNA repair and cell cycle checkpoint proteins. | Paper_evidence | WBPaper00003353 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 14 Jun 2011 00:00:00 | ||||||||
| Automated_description | Predicted to enable chromatin binding activity. Predicted to contribute to DNA clamp loader activity. Predicted to be involved in DNA damage checkpoint signaling; DNA repair; and mitotic DNA replication checkpoint signaling. Predicted to be located in nucleus. Is an ortholog of human RAD17 (RAD17 checkpoint clamp loader component). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info (4) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00077189 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00068168 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00064103 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046067 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014188 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027844 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00111951 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012118 | ||||||||
| Expr1031163 | |||||||||
| Expr1149959 | |||||||||
| Expr2012587 | |||||||||
| Expr2030823 | |||||||||
| Drives_construct | WBCnstr00036530 | ||||||||
| Construct_product | WBCnstr00036530 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (134) | |||||||||
| Interaction | WBInteraction000007622 | ||||||||
| WBInteraction000035188 | |||||||||
| WBInteraction000035189 | |||||||||
| WBInteraction000038125 | |||||||||
| WBInteraction000045408 | |||||||||
| WBInteraction000046909 | |||||||||
| WBInteraction000047774 | |||||||||
| WBInteraction000048570 | |||||||||
| WBInteraction000048571 | |||||||||
| WBInteraction000050573 | |||||||||
| WBInteraction000106205 | |||||||||
| WBInteraction000106247 | |||||||||
| WBInteraction000106414 | |||||||||
| WBInteraction000106462 | |||||||||
| WBInteraction000115333 | |||||||||
| WBInteraction000115334 | |||||||||
| WBInteraction000115347 | |||||||||
| WBInteraction000117917 | |||||||||
| WBInteraction000128370 | |||||||||
| WBInteraction000128371 | |||||||||
| WBInteraction000132248 | |||||||||
| WBInteraction000153978 | |||||||||
| WBInteraction000167262 | |||||||||
| WBInteraction000217906 | |||||||||
| WBInteraction000501817 | |||||||||
| WBInteraction000539857 | |||||||||
| WBInteraction000539858 | |||||||||
| WBInteraction000539887 | |||||||||
| WBInteraction000539931 | |||||||||
| WBInteraction000550993 | |||||||||
| WBInteraction000550994 | |||||||||
| WBInteraction000551013 | |||||||||
| Map_info | Map | II | Position | 14.5882 | Error | 0.083821 | |||
| Positive | Positive_clone | F32A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4980 | |||||||
| 4770 | |||||||||
| 5032 | |||||||||
| 5728 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
