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WormBase Tree Display for Gene: WBGene00001966

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Name Class

WBGene00001966EvidenceCGC_data_submission
SMapS_parentSequenceC17C3
IdentityVersion2
NameCGC_namehlh-27Person_evidenceWBPerson346
Sequence_nameC17C3.10
Molecular_nameC17C3.10
C17C3.10.1
CE46787
Other_nameCELE_C17C3.10Accession_evidenceNDBBX284602
Public_namehlh-27
DB_infoDatabaseAceViewgene2F828
WormQTLgeneWBGene00001966
WormFluxgeneWBGene00001966
NDBlocus_tagCELE_C17C3.10
PanthergeneCAEEL|WormBase=WBGene00001966|UniProtKB=Q18056
familyPTHR10985
NCBIgene182719
RefSeqproteinNM_062664.4
TREEFAMTREEFAM_IDTF322171
TrEMBLUniProtAccQ18056
UniProt_GCRPUniProtAccQ18056
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:26WBPerson1971EventImportedInitial conversion from geneace
203 Oct 2011 10:56:13WBPerson1867EventSplit_intoWBGene00219272
Split_intoWBGene00219272
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhlh
Allele (17)
StrainWBStrain00051158
RNASeq_FPKM (74)
GO_annotation00060095
00060096
00060097
00060098
00060099
00060100
00109819
Ortholog (22)
ParalogWBGene00001964Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00001965Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00003008Caenorhabditis elegansFrom_analysisPanther
WBGene00001968Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00001967Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
Structured_description (2)
Molecular_infoCorresponding_CDSC17C3.10
Corresponding_CDS_historyC17C3.10:wp228
Corresponding_transcriptC17C3.10.1
Associated_featureWBsf978830
WBsf981202
WBsf223060
Transcription_factorWBTranscriptionFactor000074
Experimental_infoRNAi_resultWBRNAi00010905Inferred_automaticallyRNAi_primary
WBRNAi00010899Inferred_automaticallyRNAi_primary
WBRNAi00084010Inferred_automaticallyRNAi_primary
WBRNAi00040773Inferred_automaticallyRNAi_primary
WBRNAi00024579Inferred_automaticallyRNAi_primary
WBRNAi00040785Inferred_automaticallyRNAi_primary
WBRNAi00027179Inferred_automaticallyRNAi_primary
Expr_patternExpr3496
Expr8068
Expr1028370
Expr1144810
Expr2012502
Expr2030741
Drives_constructWBCnstr00005213
WBCnstr00011428
WBCnstr00015158
WBCnstr00036554
Construct_productWBCnstr00005213
WBCnstr00016893
WBCnstr00036554
Microarray_resultsSMD_C17C3.10
SMD_C17C3.11
A_12_P151226
Expression_cluster (48)
InteractionWBInteraction000051974
WBInteraction000113647
WBInteraction000141137
WBInteraction000141772
WBInteraction000146694
WBInteraction000147802
WBInteraction000148119
WBInteraction000149013
WBInteraction000160665
WBInteraction000161599
WBInteraction000165437
WBInteraction000172647
WBInteraction000172808
WBInteraction000176170
WBInteraction000181241
WBInteraction000183308
WBInteraction000187321
WBInteraction000187764
WBInteraction000188021
WBInteraction000191419
WBInteraction000193701
WBInteraction000193821
WBInteraction000196549
WBInteraction000197199
WBInteraction000198690
WBInteraction000198842
WBInteraction000203313
WBInteraction000203332
WBInteraction000203895
WBInteraction000206586
WBInteraction000208118
WBInteraction000209534
WBInteraction000217155
WBInteraction000218474
WBInteraction000223530
WBInteraction000225552
WBInteraction000226434
WBInteraction000228318
WBInteraction000230950
WBInteraction000232348
WBInteraction000232674
WBInteraction000235641
WBInteraction000236790
WBInteraction000238342
WBInteraction000238811
WBInteraction000245904
WBInteraction000247442
WBInteraction000252492
WBInteraction000253344
WBInteraction000263058
WBInteraction000264240
WBInteraction000269832
WBInteraction000270746
WBInteraction000271794
WBInteraction000276102
WBInteraction000276189
WBInteraction000279636
WBInteraction000280072
WBInteraction000281834
WBInteraction000283012
WBInteraction000286507
WBInteraction000287845
WBInteraction000296433
WBInteraction000299085
WBInteraction000299215
WBInteraction000300964
WBInteraction000302662
WBInteraction000305282
WBInteraction000305443
WBInteraction000309280
WBInteraction000309915
WBInteraction000310701
WBInteraction000310871
WBInteraction000312689
WBInteraction000312997
WBInteraction000314088
WBInteraction000314898
WBInteraction000317580
WBInteraction000321979
WBInteraction000325733
WBInteraction000325817
WBInteraction000332244
WBInteraction000337059
WBInteraction000340670
WBInteraction000342159
WBInteraction000344589
WBInteraction000345175
WBInteraction000345516
WBInteraction000346978
WBInteraction000347559
WBInteraction000351082
WBInteraction000351375
WBInteraction000352053
WBInteraction000354480
WBInteraction000354992
WBInteraction000361536
WBInteraction000373690
WBInteraction000376121
WBInteraction000376221
WBInteraction000377646
WBInteraction000380996
WBInteraction000381992
WBInteraction000389183
WBInteraction000392751
WBInteraction000393804
WBInteraction000399603
WBInteraction000400409
WBInteraction000408015
WBInteraction000408134
WBInteraction000408382
WBInteraction000417915
WBInteraction000418406
WBInteraction000419836
WBInteraction000420750
WBInteraction000425177
WBInteraction000439593
WBInteraction000442755
WBInteraction000449901
WBInteraction000453193
WBInteraction000455792
WBInteraction000460390
WBInteraction000526291
WBInteraction000526307
WBInteraction000526308
WBInteraction000526309
WBInteraction000526310
WBInteraction000526311
WBInteraction000526312
WBInteraction000526313
WBInteraction000526314
WBInteraction000526315
WBInteraction000526316
WBInteraction000526317
WBInteraction000526318
WBInteraction000526319
WBInteraction000526320
WBInteraction000526321
WBInteraction000526322
WBInteraction000526323
WBInteraction000526324
WBInteraction000526325
WBInteraction000526326
WBInteraction000526327
WBInteraction000526328
WBInteraction000526329
WBInteraction000526330
WBInteraction000526331
WBInteraction000526332
WBInteraction000526333
WBInteraction000526334
WBInteraction000526335
WBInteraction000526336
WBInteraction000526337
WBInteraction000526338
WBInteraction000526339
WBInteraction000526340
WBInteraction000526341
WBInteraction000526342
WBInteraction000526343
WBInteraction000526344
WBInteraction000526345
WBInteraction000526346
WBInteraction000526347
WBInteraction000526348
WBInteraction000526538
WBInteraction000527270
WBInteraction000527423
WBInteraction000528654
WBInteraction000528668
WBInteraction000529165
WBInteraction000529271
WBInteraction000529588
WBInteraction000529844
WBInteraction000530449
WBInteraction000530687
WBInteraction000531385
WBInteraction000531442
WBInteraction000532628
WBInteraction000533186
WBInteraction000533195
WBInteraction000534258
WBInteraction000534395
Map_infoMapIIPosition-1.18532Error0.00229
PositivePositive_cloneC17C3Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00025235
WBPaper00027287
WBPaper00027309
WBPaper00029033
WBPaper00034761
WBPaper00062117
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene