WormBase Tree Display for Gene: WBGene00001585

WBGene00001585 SMap: S_parent: Sequence: M04B2
  Identity: Version: 1
    Name: CGC_name: gfl-1 Person_evidence: WBPerson206
      Sequence_name: M04B2.3
      Molecular_name (3)
      Other_name: CELE_M04B2.3 Accession_evidence: NDB BX284604
      Public_name: gfl-1
    DB_info: Database: AceView gene 4M287
        WormQTL gene WBGene00001585
        WormFlux gene WBGene00001585
        NDB locus_tag CELE_M04B2.3
        Panther gene CAEEL|WormBase=WBGene00001585|UniProtKB=Q21501
          family PTHR23195
        NCBI gene 187434
        RefSeq protein NM_069771.2
        TrEMBL UniProtAcc Q21501
        UniProt_GCRP UniProtAcc Q21501
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:25 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gfl
    Allele (18)
    Strain: WBStrain00036024
      WBStrain00036032
    RNASeq_FPKM (74)
    GO_annotation (11)
    Ortholog (42)
    Paralog: WBGene00013692 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: gfl-1 encodes an ortholog of human GLIOMA-AMPLIFIED SEQUENCE-41 (GAS41; OMIM:602116, found in increased copy number in low-grade glioma); loss of GLF-1, which is predicted to associate with chromatin, results in potent suppression of the RNA interference (RNAi) mechanism; GLF-1 is also similar to the transcription factors (yeast and human) AF-9 and human ENL, and thus may represent a novel class of transcription factors. Paper_evidence: WBPaper00005193
            WBPaper00013026
            WBPaper00013597
          Curator_confirmed: WBPerson1843
            WBPerson1823
            WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable chromatin binding activity and histone binding activity. Involved in regulatory ncRNA-mediated post-transcriptional gene silencing. Predicted to be located in nucleus. Predicted to be part of NuA4 histone acetyltransferase complex. Is an ortholog of human YEATS4 (YEATS domain containing 4). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: M04B2.3
    Corresponding_transcript: M04B2.3.1
    Other_sequence (25)
    Associated_feature: WBsf646382
      WBsf646383
      WBsf976976
      WBsf976977
      WBsf997859
      WBsf997860
      WBsf1018216
      WBsf229164
    Transcription_factor: WBTranscriptionFactor000174
  Experimental_info: RNAi_result (25)
    Expr_pattern: Expr1022473
      Expr1030951
      Expr1154583
      Expr2012030
      Expr2030266
    Drives_construct: WBCnstr00036844
    Construct_product: WBCnstr00036844
    Microarray_results (20)
    Expression_cluster (122)
    Interaction: WBInteraction000032898
      WBInteraction000050853
      WBInteraction000050854
      WBInteraction000050855
      WBInteraction000050856
      WBInteraction000050857
      WBInteraction000051555
      WBInteraction000051591
      WBInteraction000051620
      WBInteraction000051649
      WBInteraction000051662
      WBInteraction000103365
      WBInteraction000104144
      WBInteraction000119681
      WBInteraction000120927
      WBInteraction000145403
      WBInteraction000145830
      WBInteraction000149766
      WBInteraction000149767
      WBInteraction000149768
      WBInteraction000149769
      WBInteraction000158066
      WBInteraction000158067
      WBInteraction000158068
      WBInteraction000158069
      WBInteraction000158361
      WBInteraction000167150
      WBInteraction000174096
      WBInteraction000180533
      WBInteraction000190155
      WBInteraction000191477
      WBInteraction000217919
      WBInteraction000233279
      WBInteraction000236093
      WBInteraction000245085
      WBInteraction000284765
      WBInteraction000296713
      WBInteraction000299632
      WBInteraction000300871
      WBInteraction000311278
      WBInteraction000320883
      WBInteraction000321980
      WBInteraction000334322
      WBInteraction000339364
      WBInteraction000339365
      WBInteraction000342899
      WBInteraction000345308
      WBInteraction000347710
      WBInteraction000350600
      WBInteraction000372609
      WBInteraction000379248
      WBInteraction000383055
      WBInteraction000385561
      WBInteraction000392786
      WBInteraction000394277
      WBInteraction000400273
      WBInteraction000401401
      WBInteraction000408199
      WBInteraction000410135
      WBInteraction000410458
      WBInteraction000411721
      WBInteraction000413400
      WBInteraction000414911
      WBInteraction000424406
      WBInteraction000425267
      WBInteraction000430932
      WBInteraction000434165
      WBInteraction000435581
      WBInteraction000437336
      WBInteraction000448106
      WBInteraction000453822
      WBInteraction000454792
      WBInteraction000455345
      WBInteraction000461634
      WBInteraction000471350
      WBInteraction000473712
      WBInteraction000522172
      WBInteraction000538952
      WBInteraction000539119
      WBInteraction000539214
      WBInteraction000539350
      WBInteraction000540126
      WBInteraction000540148
      WBInteraction000548461
      WBInteraction000548462
      WBInteraction000548463
      WBInteraction000584269
  Map_info: Map: IV Position: 4.99219 Error: 0.001448
    Positive: Positive_clone: M04B2 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4863
        4832
        4487
        5044
    Pseudo_map_position
  Reference (14)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene