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WormBase Tree Display for Gene: WBGene00000800

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Name Class

WBGene00000800SMapS_parentSequenceY23H5A
IdentityVersion2
NameCGC_namecars-1Person_evidenceWBPerson36
WBPerson10953
Sequence_nameY23H5A.7
Molecular_nameY23H5A.7b
Y23H5A.7b.1
CE54491
Y23H5A.7c
CE49746
Y23H5A.7c.1
Other_namecrs-1
CELE_Y23H5A.7Accession_evidenceNDBBX284601
Public_namecars-1
DB_infoDatabaseAceViewgene1D192
WormQTLgeneWBGene00000800
WormFluxgeneWBGene00000800
NDBlocus_tagCELE_Y23H5A.7
PanthergeneCAEEL|WormBase=WBGene00000800|UniProtKB=O76618
familyPTHR10890
NCBIgene171821
RefSeqproteinNM_001306359.3
NM_058613.7
KEGGKEGG_id6.1.1.16
NemaPathKEGG_id6.1.1.16
TrEMBLUniProtAccA0A061ACL3
A0A8S4QD27
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:21WBPerson1971EventImportedInitial conversion from geneace
229 Jan 2010 14:16:16WBPerson2970Name_changeCGC_namecars-1
Other_namecrs-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcars
Allele (97)
StrainWBStrain00036845
RNASeq_FPKM (74)
GO_annotation (17)
Ortholog (41)
ParalogWBGene00000801Caenorhabditis elegansFrom_analysismodENCODE_Pseudogenes
Structured_descriptionConcise_descriptioncars-1 encodes a predicted cytoplasmic cysteinyl-tRNA synthetase (CysRS), a class I aminoacyl-tRNA synthetase that catalyzes the attachment of cysteine to its cognate tRNA and is thus required for protein biosynthesis; CARS-1 is essential for embryonic and larval development, and is required for molting and a normal rate of postembryonic development.Paper_evidenceWBPaper00004402
WBPaper00004424
Curator_confirmedWBPerson1843
Date_last_updated03 Nov 2015 00:00:00
Automated_descriptionPredicted to enable ATP binding activity and cysteine-tRNA ligase activity. Predicted to be involved in cysteinyl-tRNA aminoacylation. Predicted to be located in cytoplasm. Is an ortholog of human CARS1 (cysteinyl-tRNA synthetase 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY23H5A.7b
Y23H5A.7c
Corresponding_CDS_historyY23H5A.7a:wp282
Y23H5A.7b:wp282
Corresponding_transcriptY23H5A.7b.1
Y23H5A.7c.1
Other_sequence (60)
Associated_feature (12)
Experimental_infoRNAi_resultWBRNAi00095773Inferred_automaticallyRNAi_primary
WBRNAi00094332Inferred_automaticallyRNAi_primary
WBRNAi00066875Inferred_automaticallyRNAi_primary
WBRNAi00085742Inferred_automaticallyRNAi_primary
WBRNAi00096321Inferred_automaticallyRNAi_primary
WBRNAi00066874Inferred_automaticallyRNAi_primary
WBRNAi00055704Inferred_automaticallyRNAi_primary
WBRNAi00026627Inferred_automaticallyRNAi_primary
WBRNAi00064211Inferred_automaticallyRNAi_primary
WBRNAi00094448Inferred_automaticallyRNAi_primary
WBRNAi00094074Inferred_automaticallyRNAi_primary
WBRNAi00096301Inferred_automaticallyRNAi_primary
WBRNAi00096570Inferred_automaticallyRNAi_primary
WBRNAi00096901Inferred_automaticallyRNAi_primary
WBRNAi00026628Inferred_automaticallyRNAi_primary
WBRNAi00096404Inferred_automaticallyRNAi_primary
WBRNAi00085416Inferred_automaticallyRNAi_primary
WBRNAi00004563Inferred_automaticallyRNAi_primary
WBRNAi00096487Inferred_automaticallyRNAi_primary
WBRNAi00055703Inferred_automaticallyRNAi_primary
WBRNAi00004566Inferred_automaticallyRNAi_primary
WBRNAi00064185Inferred_automaticallyRNAi_primary
WBRNAi00116639Inferred_automaticallyRNAi_primary
WBRNAi00097777Inferred_automaticallyRNAi_primary
WBRNAi00096962Inferred_automaticallyRNAi_primary
Expr_patternExpr1015575
Expr1030499
Expr1159226
Expr2009721
Expr2027960
Drives_constructWBCnstr00037987
Construct_productWBCnstr00037987
Microarray_results (34)
Expression_cluster (107)
InteractionWBInteraction000041868
WBInteraction000114711
WBInteraction000118000
WBInteraction000142189
WBInteraction000152748
WBInteraction000159910
WBInteraction000166550
WBInteraction000172394
WBInteraction000177703
WBInteraction000178135
WBInteraction000178137
WBInteraction000178660
WBInteraction000212563
WBInteraction000225349
WBInteraction000235237
WBInteraction000241678
WBInteraction000242697
WBInteraction000254553
WBInteraction000264939
WBInteraction000276969
WBInteraction000282905
WBInteraction000289576
WBInteraction000296882
WBInteraction000302653
WBInteraction000309225
WBInteraction000323109
WBInteraction000325160
WBInteraction000332090
WBInteraction000337268
WBInteraction000341404
WBInteraction000344961
WBInteraction000345510
WBInteraction000347519
WBInteraction000348668
WBInteraction000352283
WBInteraction000353668
WBInteraction000359983
WBInteraction000374252
WBInteraction000375333
WBInteraction000390030
WBInteraction000390387
WBInteraction000398418
WBInteraction000402637
WBInteraction000402747
WBInteraction000405199
WBInteraction000412253
WBInteraction000426233
WBInteraction000432422
WBInteraction000434122
WBInteraction000438905
WBInteraction000439697
WBInteraction000441362
WBInteraction000446517
WBInteraction000450764
WBInteraction000456764
WBInteraction000462181
WBInteraction000462699
WBInteraction000462711
WBInteraction000463749
WBInteraction000464264
WBInteraction000464541
WBInteraction000464752
WBInteraction000465213
WBInteraction000465226
WBInteraction000465511
WBInteraction000466850
WBInteraction000468849
WBInteraction000468984
WBInteraction000469334
WBInteraction000469365
WBInteraction000469703
WBInteraction000472100
WBInteraction000472133
WBInteraction000472274
WBInteraction000472793
WBInteraction000473248
WBInteraction000473632
WBInteraction000473633
WBInteraction000474891
WBInteraction000518859
WBInteraction000549226
WBInteraction000550265
WBInteraction000552178
WBInteraction000552541
WBInteraction000553377
WBInteraction000553605
WBInteraction000553793
WBInteraction000563181
WBInteraction000568314
WBInteraction000577517
WBInteraction000586674
Map_infoMapIPosition-8.11751Error0.030644
PositivePositive_cloneY23H5AInferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00041771
WBPaper00055090
WBPaper00064339
Remarkdl1 : probably cytoplasmic
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene