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WormBase Tree Display for Gene: WBGene00000182

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Name Class

WBGene00000182SMapS_parentSequenceB0336
IdentityVersion3
NameCGC_namearf-1
Sequence_nameB0336.2
Molecular_nameB0336.2
B0336.2.1
CE00696
B0336.2.2
Other_nameARF/1
arf-1.2
CELE_B0336.2Accession_evidenceNDBBX284603
Public_namearf-1
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:20WBPerson1971EventImportedInitial conversion from geneace
205 Nov 2004 15:32:14WBPerson2970Name_changeCGC_namearf-1.2
310 Sep 2020 13:24:17WBPerson1983Name_changeCGC_namearf-1
Other_namearf-1.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classarf
Allele (33)
Legacy_information[C.elegansII] NMK. Encodes 181 aa predicted class I ARF. [CGC, MQ]
RNASeq_FPKM (74)
GO_annotation (22)
Contained_in_operonCEOP3332
Ortholog (45)
ParalogWBGene00000180Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000183Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000189Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000193Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000184Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000187Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000190Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000188Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000192Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001358Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00012132Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021349Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021841Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00022678Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionarf-1.2 encodes an ADP-ribosylation factor homolog required in vivo for embryonic development, fertility, locomotion, vulval development, and cuticular synthesis; ARF proteins are N-myristoylated GTPases that regulate membrane traffic and the actin cytoskeleton, and that activate both phospholipase D1 (PLD1) and phosphatidylinositol 4-phosphate 5-kinase.Paper_evidenceWBPaper00012958
WBPaper00013160
WBPaper00015195
Curator_confirmedWBPerson567
Date_last_updated16 Jul 2007 00:00:00
Automated_descriptionPredicted to enable GTP binding activity and GTPase activity. Involved in several processes, including oocyte development; regulation of apoptotic process involved in development; and regulation of receptor-mediated endocytosis. Located in endoplasmic reticulum. Expressed in pharyngeal muscle cell; uterus; ventral nerve cord; and vulval precursor cell. Human ortholog(s) of this gene implicated in periventricular nodular heterotopia. Is an ortholog of human ARF1 (ADP ribosylation factor 1) and ARF3 (ADP ribosylation factor 3).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0050454Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:652)
Molecular_infoCorresponding_CDSB0336.2
Corresponding_transcriptB0336.2.1
B0336.2.2
Other_sequence (178)
Associated_feature (13)
Experimental_infoRNAi_result (38)
Expr_patternChronogram1686
Expr3149
Expr4834
Expr5055
Expr15679
Expr1028066
Expr1030106
Expr1143124
Expr2009391
Expr2027627
Drives_constructWBCnstr00002999
WBCnstr00011177
WBCnstr00012265
WBCnstr00019869
WBCnstr00037680
WBCnstr00042476
Construct_productWBCnstr00008785
WBCnstr00008786
WBCnstr00019869
WBCnstr00037680
WBCnstr00042476
Microarray_results (26)
Expression_cluster (132)
InteractionWBInteraction000009753
WBInteraction000029929
WBInteraction000033967
WBInteraction000034831
WBInteraction000035218
WBInteraction000037233
WBInteraction000037902
WBInteraction000037903
WBInteraction000038333
WBInteraction000039005
WBInteraction000040580
WBInteraction000041341
WBInteraction000042780
WBInteraction000046778
WBInteraction000047501
WBInteraction000048659
WBInteraction000049344
WBInteraction000049440
WBInteraction000051031
WBInteraction000051077
WBInteraction000051123
WBInteraction000051169
WBInteraction000051215
WBInteraction000051261
WBInteraction000102235
WBInteraction000102259
WBInteraction000105333
WBInteraction000105597
WBInteraction000108789
WBInteraction000112198
WBInteraction000113135
WBInteraction000114831
WBInteraction000118869
WBInteraction000118870
WBInteraction000119383
WBInteraction000121273
WBInteraction000121575
WBInteraction000121858
WBInteraction000122530
WBInteraction000122531
WBInteraction000122532
WBInteraction000122533
WBInteraction000122534
WBInteraction000123948
WBInteraction000133368
WBInteraction000133466
WBInteraction000138576
WBInteraction000138895
WBInteraction000139191
WBInteraction000141717
WBInteraction000146853
WBInteraction000149798
WBInteraction000157045
WBInteraction000159745
WBInteraction000159746
WBInteraction000161091
WBInteraction000162116
WBInteraction000162236
WBInteraction000162237
WBInteraction000162892
WBInteraction000163311
WBInteraction000166996
WBInteraction000172887
WBInteraction000172888
WBInteraction000172889
WBInteraction000174081
WBInteraction000175543
WBInteraction000184665
WBInteraction000188511
WBInteraction000188820
WBInteraction000193135
WBInteraction000195092
WBInteraction000206660
WBInteraction000224716
WBInteraction000228961
WBInteraction000231729
WBInteraction000236193
WBInteraction000239355
WBInteraction000244723
WBInteraction000248423
WBInteraction000264827
WBInteraction000268145
WBInteraction000268146
WBInteraction000268826
WBInteraction000272736
WBInteraction000274086
WBInteraction000274924
WBInteraction000274984
WBInteraction000281699
WBInteraction000281700
WBInteraction000282002
WBInteraction000283916
WBInteraction000298479
WBInteraction000300985
WBInteraction000312496
WBInteraction000316148
WBInteraction000317139
WBInteraction000321386
WBInteraction000323653
WBInteraction000329446
WBInteraction000330880
WBInteraction000331770
WBInteraction000333400
WBInteraction000340268
WBInteraction000340269
WBInteraction000348485
WBInteraction000351308
WBInteraction000369166
WBInteraction000369477
WBInteraction000371252
WBInteraction000375000
WBInteraction000384076
WBInteraction000387513
WBInteraction000392811
WBInteraction000395288
WBInteraction000397731
WBInteraction000398396
WBInteraction000402489
WBInteraction000411208
WBInteraction000411379
WBInteraction000416111
WBInteraction000417730
WBInteraction000422684
WBInteraction000426448
WBInteraction000426504
WBInteraction000435918
WBInteraction000439377
WBInteraction000441883
WBInteraction000447605
WBInteraction000451362
WBInteraction000452386
WBInteraction000453206
WBInteraction000458571
WBInteraction000461844
WBInteraction000463058
WBInteraction000463107
WBInteraction000463111
WBInteraction000463750
WBInteraction000463832
WBInteraction000464526
WBInteraction000465034
WBInteraction000465138
WBInteraction000465288
WBInteraction000465447
WBInteraction000466958
WBInteraction000468430
WBInteraction000468578
WBInteraction000468750
WBInteraction000468986
WBInteraction000468987
WBInteraction000471437
WBInteraction000472460
WBInteraction000474908
WBInteraction000500586
WBInteraction000500587
WBInteraction000500591
WBInteraction000501144
WBInteraction000501145
WBInteraction000502378
WBInteraction000516615
WBInteraction000516616
WBInteraction000517635
WBInteraction000517665
WBInteraction000517715
WBInteraction000518516
WBInteraction000522079
WBInteraction000522109
WBInteraction000524009
WBInteraction000524529
WBInteraction000549522
WBInteraction000549523
WBInteraction000557888
WBInteraction000559021
WBInteraction000560526
WBInteraction000568778
WBInteraction000571813
WBInteraction000573348
WBInteraction000574529
WBInteraction000577481
WBInteraction000579602
WBInteraction000579858
WBInteraction000584438
Map_infoMapIIIPosition-1.44726Error0.000356
PositivePositive_cloneB0336Inferred_automaticallyFrom sequence, transcript, pseudogene data
NM#G4
Mapping_dataMulti_point4788
5049
Pseudo_map_position
Reference (37)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
This gene was previously assigned the CGC name arf-1. It has been re-assigned to arf-1.2Curator_confirmedWBPerson2970
MethodGene