WormBase Tree Display for Gene: WBGene00015567

WBGene00015567 SMap: S_parent: Sequence: C07D10
  Identity: Version: 2
    Name: CGC_name: bath-44 Person_evidence: WBPerson655
      Sequence_name: C07D10.2
      Molecular_name: C07D10.2a
        C07D10.2a.1
        CE27057
        C07D10.2b
        CE29072
        C07D10.2b.1
      Other_name: CELE_C07D10.2 Accession_evidence: NDB BX284602
      Public_name: bath-44
    DB_info: Database: AceView gene 2H687
        WormQTL gene WBGene00015567
        WormFlux gene WBGene00015567
        NDB locus_tag CELE_C07D10.2
        Panther gene CAEEL|WormBase=WBGene00015567|UniProtKB=H2KYJ3
          family PTHR24413
        NCBI gene 174210
        RefSeq protein NM_063149.5
            NM_063148.7
        TREEFAM TREEFAM_ID TF313419
        TrEMBL UniProtAcc Q17782
            H2KYJ3
        UniProt_GCRP UniProtAcc H2KYJ3
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 22 Aug 2005 16:08:42 WBPerson2970 Name_change: CGC_name: bath-44
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: bath
    Allele (33)
    RNASeq_FPKM (74)
    GO_annotation: 00021687
      00021688
      00021689
      00021690
      00021691
      00021692
    Ortholog (40)
    Paralog: WBGene00003209 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00011815 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00016803 Caenorhabditis elegans From_analysis: Panther
      WBGene00018137 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00007778 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00009820 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00018946 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: The C07D10.2 gene encodes a protein with a meprin-associated Traf homology (MATH) domain that may be involved in apoptosis. Paper_evidence: WBPaper00004589
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable ubiquitin protein ligase binding activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and regulation of proteolysis. Predicted to be located in cytoplasm and nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C07D10.2a
      C07D10.2b
    Corresponding_transcript: C07D10.2a.1
      C07D10.2b.1
    Other_sequence: CR11698
      BUC02129_1
      GRC05835_1
      JI181718.1
      MCC00164_1
      CRC09183_1
      AI124159.1
      PPC11636_1
      CR07179
      CBC15730_1
      JI170319.1
      Oden_isotig28841
      OVC01871_1
      Oden_isotig19904
      CR11699
      JI468894.1
      CRC00505_1
      CBC01374_1
      BF118510.1
      AY705928.1
      BMC09093_1
      MC00135
      BXC07301_1
      GR10923
    Associated_feature (17)
  Experimental_info: RNAi_result: WBRNAi00088608 Inferred_automatically: RNAi_primary
      WBRNAi00082914 Inferred_automatically: RNAi_primary
      WBRNAi00000582 Inferred_automatically: RNAi_primary
      WBRNAi00039990 Inferred_automatically: RNAi_primary
      WBRNAi00010379 Inferred_automatically: RNAi_primary
      WBRNAi00085655 Inferred_automatically: RNAi_primary
      WBRNAi00088715 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr413
      Expr1012215
      Expr1036668
      Expr1144069
      Expr2009561
      Expr2027798
    Drives_construct: WBCnstr00028745
    Construct_product: WBCnstr00028745
    Microarray_results (31)
    Expression_cluster (117)
    Interaction: WBInteraction000032419
      WBInteraction000184819
      WBInteraction000184917
      WBInteraction000200723
      WBInteraction000206257
      WBInteraction000231001
      WBInteraction000236101
      WBInteraction000245005
      WBInteraction000254347
      WBInteraction000258453
      WBInteraction000262654
      WBInteraction000273091
      WBInteraction000277766
      WBInteraction000278849
      WBInteraction000287353
      WBInteraction000289480
      WBInteraction000297482
      WBInteraction000304279
      WBInteraction000312155
      WBInteraction000316732
      WBInteraction000317924
      WBInteraction000325949
      WBInteraction000326861
      WBInteraction000328820
      WBInteraction000354106
      WBInteraction000355344
      WBInteraction000361873
      WBInteraction000362208
      WBInteraction000365036
      WBInteraction000369966
      WBInteraction000383463
      WBInteraction000395014
      WBInteraction000401162
      WBInteraction000422721
      WBInteraction000425714
      WBInteraction000443344
      WBInteraction000446361
      WBInteraction000461392
      WBInteraction000514907
      WBInteraction000543145
      WBInteraction000543860
      WBInteraction000544543
      WBInteraction000544552
      WBInteraction000544578
      WBInteraction000544618
      WBInteraction000546805
      WBInteraction000559975
      WBInteraction000560266
  Map_info: Map: II Position: 0.502905 Error: 1.5e-05
    Positive: Positive_clone: C07D10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00035598
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene