WormBase Tree Display for Gene: WBGene00000641

WBGene00000641 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: K08C9
  Identity: Version: 1
    Name: CGC_name: col-65 Person_evidence: WBPerson345
      Sequence_name: K08C9.4
      Molecular_name: K08C9.4
        K08C9.4.1
        CE18860
      Other_name: CELE_K08C9.4 Accession_evidence: NDB BX284601
      Public_name: col-65
    DB_info: Database: AceView gene 1M82
        WormQTL gene WBGene00000641
        WormFlux gene WBGene00000641
        NDB locus_tag CELE_K08C9.4
        Panther gene CAEEL|WormBase=WBGene00000641|UniProtKB=Q9XUT4
          family PTHR24637
        NCBI gene 187138
        RefSeq protein NM_060535.3
        TREEFAM TREEFAM_ID TF316783
        TrEMBL UniProtAcc Q9XUT4
        UniProt_GCRP UniProtAcc Q9XUT4
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele (38)
    RNASeq_FPKM (74)
    GO_annotation: 00102086
      00102087
      00107642
    Ortholog (39)
    Paralog (170)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K08C9.4
    Corresponding_transcript: K08C9.4.1
    Other_sequence: Tcir_isotig29452
      JI179442.1
      JO469476.1
      AS03148
      Dviv_isotig18262
      BU586727.1
      ASC00094_1
      AA720419.1
      AS08470
      CR07763
      CJC06278_1
      CRC00346_1
    Associated_feature: WBsf649625
      WBsf717578
      WBsf220347
  Experimental_info: RNAi_result: WBRNAi00050243 Inferred_automatically: RNAi_primary
      WBRNAi00034115 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024099
      Expr1030378
      Expr1153939
      Expr2010415
      Expr2028656
    Drives_construct: WBCnstr00037404
    Construct_product: WBCnstr00037404
    Microarray_results (19)
    Expression_cluster (287)
    Interaction: WBInteraction000101705
      WBInteraction000102247
      WBInteraction000102451
      WBInteraction000102637
      WBInteraction000102909
      WBInteraction000102957
      WBInteraction000103737
      WBInteraction000104005
      WBInteraction000104126
      WBInteraction000104189
      WBInteraction000104292
      WBInteraction000104510
      WBInteraction000104800
      WBInteraction000105404
      WBInteraction000105421
      WBInteraction000105642
      WBInteraction000105909
      WBInteraction000105925
      WBInteraction000105935
      WBInteraction000106083
      WBInteraction000109988
      WBInteraction000110322
      WBInteraction000110413
      WBInteraction000110536
      WBInteraction000112202
      WBInteraction000112395
      WBInteraction000112815
      WBInteraction000113382
      WBInteraction000113563
      WBInteraction000115668
      WBInteraction000115695
      WBInteraction000116164
      WBInteraction000117840
      WBInteraction000118492
      WBInteraction000120768
      WBInteraction000121679
      WBInteraction000127241
      WBInteraction000136728
      WBInteraction000137002
      WBInteraction000137557
      WBInteraction000138791
      WBInteraction000140971
      WBInteraction000145494
      WBInteraction000145816
      WBInteraction000150986
      WBInteraction000151695
      WBInteraction000156653
      WBInteraction000159686
      WBInteraction000171541
      WBInteraction000177806
      WBInteraction000187970
      WBInteraction000192607
      WBInteraction000193604
      WBInteraction000196471
      WBInteraction000197529
      WBInteraction000199966
      WBInteraction000200046
      WBInteraction000201831
      WBInteraction000205587
      WBInteraction000208502
      WBInteraction000209813
      WBInteraction000211355
      WBInteraction000212155
      WBInteraction000212711
      WBInteraction000220236
      WBInteraction000220940
      WBInteraction000223417
      WBInteraction000224463
      WBInteraction000227651
      WBInteraction000231036
      WBInteraction000236701
      WBInteraction000238288
      WBInteraction000238968
      WBInteraction000240674
      WBInteraction000246108
      WBInteraction000253725
      WBInteraction000259131
      WBInteraction000265595
      WBInteraction000271841
      WBInteraction000272537
      WBInteraction000273188
      WBInteraction000275061
      WBInteraction000277916
      WBInteraction000280832
      WBInteraction000291787
      WBInteraction000299208
      WBInteraction000306390
      WBInteraction000307003
      WBInteraction000310819
      WBInteraction000318148
      WBInteraction000329133
      WBInteraction000333052
      WBInteraction000337682
      WBInteraction000341545
      WBInteraction000361436
      WBInteraction000371823
      WBInteraction000375621
      WBInteraction000376056
      WBInteraction000378893
      WBInteraction000381912
      WBInteraction000395821
      WBInteraction000399405
      WBInteraction000401033
      WBInteraction000404574
      WBInteraction000417259
      WBInteraction000419158
      WBInteraction000426681
      WBInteraction000426753
      WBInteraction000432120
      WBInteraction000434873
      WBInteraction000448008
      WBInteraction000450493
      WBInteraction000469616
      WBInteraction000472067
      WBInteraction000472667
  Map_info: Map: I Position: 8.94645 Error: 0.050715
    Positive: Positive_clone: K08C9 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene