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WormBase Tree Display for Gene: WBGene00004029

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Name Class

WBGene00004029SMapS_parentSequenceK09B11
IdentityVersion2
NameCGC_namepik-1Person_evidenceWBPerson1122
Sequence_nameK09B11.1
Molecular_nameK09B11.1a
K09B11.1a.1
CE31033
K09B11.1b
CE45959
K09B11.1a.2
K09B11.1b.1
K09B11.1c
Other_nameCELE_K09B11.1Accession_evidenceNDBBX284604
Public_namepik-1
DB_infoDatabase (15)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:33WBPerson1971EventImportedInitial conversion from geneace
215 Aug 2011 12:02:42WBPerson4025EventAcquires_mergeWBGene00206467
Acquires_mergeWBGene00206467
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpik
Allele (149)
RNASeq_FPKM (74)
GO_annotation (22)
Contained_in_operonCEOP4552
OrthologWBGene00062774Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00074176Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00024957Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00157294Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00143171Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00225206Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g8721Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g8296Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g13702Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13880Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7016Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g5247Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g14460Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g6775Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g3526Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g9952Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_01102.g15685Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g14548Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold589.g5026Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00422.g11152Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_16029Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_014551Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04542Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g7292Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40132100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g12301Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00122161Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00241507Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00106112Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00268168Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293573Trichuris murisFrom_analysisWormBase-Compara
WBGene00296175Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0010441Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-060503-710Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-071116-5Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
SonicParanoid
HGNC:6112Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
OrthoFinder
OrthoInspector
PhylomeDB
HGNC:17020Homo sapiensFrom_analysisEnsEMBL-Compara
OrthoFinder
PhylomeDB
HGNC:17967Homo sapiensFrom_analysisInparanoid
OrthoInspector
SonicParanoid
MGI:107420Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
PhylomeDB
SonicParanoid
MGI:1921164Mus musculusFrom_analysisEnsEMBL-Compara
OMA
OrthoFinder
RGD:1308846Rattus norvegicusFrom_analysisEnsEMBL-Compara
OMA
OrthoFinder
PhylomeDB
RGD:1563841Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
OrthoFinder
PhylomeDB
Paralog (12)
Structured_descriptionConcise_descriptionThe pik-1 gene encodes a pelle/IRAK kinase homolog that may be involved in apoptosis.Paper_evidenceWBPaper00004589
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable ATP binding activity; protein serine kinase activity; and protein serine/threonine kinase activity. Predicted to be involved in cellular response to lipopolysaccharide and signal transduction. Predicted to be located in cytoplasm; nucleus; and plasma membrane. Expressed in RMGL; RMGR; and nervous system. Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease of musculoskeletal system (multiple); diffuse scleroderma; and melioidosis. Is an ortholog of human IRAK1 (interleukin 1 receptor associated kinase 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:612Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:17967)
DOID:9008Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:6112)
DOID:7147Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:6112)
DOID:8893Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:6112)
DOID:399Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:17020)
DOID:2841Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:17020)
DOID:1580Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:6112)
DOID:1749Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:6112)
DOID:5052Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:17020)
Molecular_infoCorresponding_CDSK09B11.1a
K09B11.1b
Corresponding_CDS_historyK09B11.1:wp80
Corresponding_transcriptK09B11.1c
K09B11.1a.1
K09B11.1a.2
K09B11.1b.1
Other_sequence (35)
Associated_featureWBsf998403
WBsf998404
Experimental_infoRNAi_resultWBRNAi00112978Inferred_automaticallyRNAi_primary
WBRNAi00016868Inferred_automaticallyRNAi_primary
WBRNAi00113208Inferred_automaticallyRNAi_primary
WBRNAi00034179Inferred_automaticallyRNAi_primary
WBRNAi00075962Inferred_automaticallyRNAi_primary
WBRNAi00050370Inferred_automaticallyRNAi_primary
Expr_patternExpr13217
Expr1010645
Expr1031931
Expr1154076
Expr2014927
Expr2033162
Drives_constructWBCnstr00038894
Construct_productWBCnstr00038894
Microarray_results (22)
Expression_cluster (63)
InteractionWBInteraction000028584
WBInteraction000031511
WBInteraction000034260
WBInteraction000045384
WBInteraction000134052
WBInteraction000134127
WBInteraction000140937
WBInteraction000280173
WBInteraction000281866
WBInteraction000292556
WBInteraction000327035
WBInteraction000372357
WBInteraction000434142
WBInteraction000448230
WBInteraction000513490
WBInteraction000513491
WBInteraction000513492
WBInteraction000516332
WBInteraction000540774
WBInteraction000567780
WBInteraction000567786
WBInteraction000567787
WBInteraction000567790
WBInteraction000567860
WBInteraction000567961
WBInteraction000567962
WBInteraction000567963
WBInteraction000567964
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WBInteraction000567975
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WBInteraction000567984
WBInteraction000567985
WBInteraction000567986
WBInteraction000567987
WBInteraction000567988
WBInteraction000567989
WBInteraction000567990
WBInteraction000567991
WBInteraction000567992
WBInteraction000567993
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WBInteraction000567995
WBInteraction000567996
WBInteraction000567997
WBInteraction000567998
WBInteraction000567999
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WBInteraction000568015
WBInteraction000568016
WBInteraction000568017
WBInteraction000568018
WBInteraction000568019
WBInteraction000568020
WBInteraction000568021
WBInteraction000568022
WBInteraction000568023
WBInteraction000568024
WBInteraction000568025
WBInteraction000568026
WBInteraction000568027
WBInteraction000568028
WBInteraction000568029
WBInteraction000568030
WBInteraction000568031
WBInteraction000568032
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WBInteraction000568034
WBInteraction000568035
WBInteraction000568036
WBInteraction000568037
WBInteraction000568038
WBInteraction000568039
WBInteraction000568040
WBInteraction000568041
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WBInteraction000568048
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WBInteraction000568055
WBInteraction000568056
WBInteraction000568057
WBInteraction000568058
WBInteraction000568059
WBInteraction000568060
WBInteraction000568061
WBInteraction000568062
WBInteraction000568063
WBInteraction000568064
WBInteraction000568065
WBInteraction000568066
WBInteraction000568067
WBInteraction000568068
WBInteraction000568069
WBInteraction000568070
WBInteraction000568071
WBInteraction000568072
WBInteraction000568073
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WBInteraction000568075
WBInteraction000568076
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WBInteraction000568078
WBInteraction000568079
WBInteraction000568080
WBInteraction000568081
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WBInteraction000568084
WBInteraction000568085
WBInteraction000568086
WBInteraction000568087
WBInteraction000568088
WBInteraction000568089
WBInteraction000568090
WBInteraction000568091
WBInteraction000568092
WBInteraction000568093
WBInteraction000568094
WBInteraction000568095
WBInteraction000568096
WBInteraction000568097
WBInteraction000568098
WBInteraction000568099
WBInteraction000568100
WBInteraction000568101
WBInteraction000568102
WBInteraction000568103
WBInteraction000568104
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WBInteraction000568106
WBInteraction000568107
WBInteraction000568108
WBInteraction000568109
WBInteraction000568110
WBInteraction000568111
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WBInteraction000568113
WBInteraction000568114
WBInteraction000568115
WBInteraction000568116
WBInteraction000568117
WBInteraction000568118
WBInteraction000568119
WBInteraction000568120
WBInteraction000568121
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WBInteraction000568123
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WBInteraction000568129
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WBInteraction000568254
WBInteraction000568263
WBInteraction000568356
WBProcessWBbiopr:00000039
Map_infoMapIVPosition9.21545Error0.07179
PositivePositive_cloneK09B11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4585
4914
Pseudo_map_position
Reference (14)
RemarkSequence given as K09B11 BUT subsequence not given [sdm]
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene