WormBase Tree Display for Gene: WBGene00001661

WBGene00001661 SMap: S_parent: Sequence: C34E10
  Identity: Version: 1
    Name: CGC_name: gop-2 Person_evidence: WBPerson247
      Sequence_name: C34E10.2
      Molecular_name: C34E10.2
        C34E10.2.1
        CE01182
      Other_name: CELE_C34E10.2 Accession_evidence: NDB BX284603
      Public_name: gop-2
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:25 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gop
    Allele (12)
    Strain: WBStrain00047681
      WBStrain00055518
    RNASeq_FPKM (74)
    GO_annotation: 00046496
      00046497
      00046498
      00046499
      00046500
      00046501
      00046502
      00046503
      00046504
      00046505
    Contained_in_operon: CEOP3272
    Ortholog: WBGene00040027 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00153801 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00075429 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00101954 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00218670 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00123371 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00234122 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g5236 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g5625 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g6708 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g19757 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g3699 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g20837 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12171 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g2682 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g12972 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g1581 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g7833 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00692.g13485 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-gop-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g12537 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_03523.g30466 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_06187 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_008452 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12939 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g19871 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30023820 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7676 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00212003 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00245421 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00261330 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00293361 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000003833 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0040346 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040801-154 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:17030 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1921504 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:1589985 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
    Paralog: WBGene00013550 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00015029 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: gop-2 encodes a member of the conserved hypothetical ATP binding protein family that affects embryonic viability, growth, and fertility. Paper_evidence: WBPaper00004403
            WBPaper00005330
            WBPaper00005654
          Curator_confirmed: WBPerson48
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable GTPase activity. Predicted to be located in cytoplasm and nucleus. Is an ortholog of human GPN1 (GPN-loop GTPase 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C34E10.2
    Corresponding_transcript: C34E10.2.1
    Other_sequence (51)
    Associated_feature: WBsf224894
  Experimental_info: RNAi_result (19)
    Expr_pattern: Expr1011297
      Expr1030994
      Expr1145899
      Expr2012174
      Expr2030410
    Drives_construct: WBCnstr00036794
    Construct_product: WBCnstr00036794
    Microarray_results (20)
    Expression_cluster (101)
    Interaction: WBInteraction000007128
      WBInteraction000007187
      WBInteraction000009419
      WBInteraction000032753
      WBInteraction000042760
      WBInteraction000045180
      WBInteraction000171990
      WBInteraction000192003
      WBInteraction000205089
      WBInteraction000209735
      WBInteraction000214495
      WBInteraction000214597
      WBInteraction000230254
      WBInteraction000236019
      WBInteraction000236512
      WBInteraction000277389
      WBInteraction000283881
      WBInteraction000294729
      WBInteraction000298671
      WBInteraction000302102
      WBInteraction000317813
      WBInteraction000329869
      WBInteraction000332001
      WBInteraction000336425
      WBInteraction000338308
      WBInteraction000340350
      WBInteraction000348252
      WBInteraction000354906
      WBInteraction000357675
      WBInteraction000358026
      WBInteraction000368337
      WBInteraction000376621
      WBInteraction000379338
      WBInteraction000380103
      WBInteraction000384162
      WBInteraction000386781
      WBInteraction000391663
      WBInteraction000393459
      WBInteraction000396090
      WBInteraction000408784
      WBInteraction000411596
      WBInteraction000414057
      WBInteraction000420588
      WBInteraction000420851
      WBInteraction000437177
      WBInteraction000438363
      WBInteraction000439755
      WBInteraction000444725
      WBInteraction000445320
      WBInteraction000450890
      WBInteraction000462909
      WBInteraction000466799
      WBInteraction000467570
      WBInteraction000470062
      WBInteraction000472064
      WBInteraction000474534
      WBInteraction000575623
      WBInteraction000584391
  Map_info: Map: III Position: -1.8553 Error: 0.00036
    Positive: Positive_clone: C34E10 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00048493
    WBPaper00055090
    WBPaper00061547
  Remark: Gene crated on basis of AY052770 [020823 krb]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene