WormBase Tree Display for Gene: WBGene00016729
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WBGene00016729 | SMap | S_parent | Sequence | C46H11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C46H11.3 | |||||||
Molecular_name | C46H11.3 | ||||||||
C46H11.3.1 | |||||||||
CE08785 | |||||||||
Other_name | CELE_C46H11.3 | Accession_evidence | NDB | BX284601 | |||||
Public_name | C46H11.3 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (14) | |||||||||
Strain | WBStrain00052076 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (13) | |||||||||
Ortholog (36) | |||||||||
Paralog | WBGene00000205 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable actin filament binding activity. Predicted to be involved in Arp2/3 complex-mediated actin nucleation and cell migration. Predicted to be located in cytoplasm. Predicted to be part of Arp2/3 protein complex. Human ortholog(s) of this gene implicated in lung squamous cell carcinoma. Is an ortholog of human ARPC5 (actin related protein 2/3 complex subunit 5) and ARPC5L (actin related protein 2/3 complex subunit 5 like). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:708) | ||||
DOID:3908 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:708) | ||||||
DOID:3907 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:708) | ||||||
Molecular_info | Corresponding_CDS | C46H11.3 | |||||||
Corresponding_transcript | C46H11.3.1 | ||||||||
Associated_feature | WBsf217615 | ||||||||
Experimental_info | RNAi_result | WBRNAi00094928 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00022829 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00042626 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00003166 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00029879 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1014216 | ||||||||
Expr1146611 | |||||||||
Expr2001696 | |||||||||
Expr2019923 | |||||||||
Drives_construct | WBCnstr00027849 | ||||||||
Construct_product | WBCnstr00027849 | ||||||||
Microarray_results | SMD_C46H11.3 | ||||||||
SMD_C46H11.7 | |||||||||
187625_at | |||||||||
A_12_P101090 | |||||||||
A_12_P165889 | |||||||||
A_12_P165890 | |||||||||
A_12_P165891 | |||||||||
A_12_P165892 | |||||||||
Aff_C46H11.3 | |||||||||
GPL13394_WBGene00016729 | |||||||||
GPL13914_C46H11.3 | |||||||||
GPL14144_C46H11.3_313-372_0.940_2_A | |||||||||
GPL19516_CGZ0009276 | |||||||||
GPL21109_C46H11.3 | |||||||||
GPL3518_CE08785 | |||||||||
GPL8304_CE_WBGene00016729_A | |||||||||
GPL8304_CE_WBGene00016729_B | |||||||||
GPL8673_C46H11_3P00174 | |||||||||
GPL8673_C46H11_3P00205 | |||||||||
GPL8673_C46H11_3P00369 | |||||||||
GPL9450_C46H11.3 | |||||||||
cea2.i.00893 | |||||||||
Expression_cluster (41) | |||||||||
Interaction | WBInteraction000033027 | ||||||||
WBInteraction000037180 | |||||||||
WBInteraction000039743 | |||||||||
WBInteraction000042788 | |||||||||
WBInteraction000050068 | |||||||||
WBInteraction000103418 | |||||||||
WBInteraction000103520 | |||||||||
WBInteraction000122344 | |||||||||
WBInteraction000137856 | |||||||||
WBInteraction000138691 | |||||||||
WBInteraction000161797 | |||||||||
WBInteraction000164459 | |||||||||
WBInteraction000174053 | |||||||||
WBInteraction000174408 | |||||||||
WBInteraction000203831 | |||||||||
WBInteraction000296768 | |||||||||
WBInteraction000329404 | |||||||||
WBInteraction000521128 | |||||||||
WBInteraction000548895 | |||||||||
Map_info | Positive | Positive_clone | C46H11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | -0.423255 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |