WormBase Tree Display for Gene: WBGene00014092
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| WBGene00014092 | SMap | S_parent | Sequence | ZK822 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | slc-5A12 | Author_evidence | WBPerson555 | |||||
| Sequence_name | ZK822.5 | ||||||||
| Molecular_name (3) | |||||||||
| Other_name | CELE_ZK822.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | slc-5A12 | ||||||||
| DB_info | Database | AceView | gene | 4M703 | |||||
| WormQTL | gene | WBGene00014092 | |||||||
| WormFlux | gene | WBGene00014092 | |||||||
| NDB | locus_tag | CELE_ZK822.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00014092|UniProtKB=Q23616 | |||||||
| family | PTHR42985 | ||||||||
| NCBI | gene | 178127 | |||||||
| RefSeq | protein | NM_001047602.6 | |||||||
| TrEMBL | UniProtAcc | Q23616 | |||||||
| UniProt_GCRP | UniProtAcc | Q23616 | |||||||
| OMIM | gene | 601843 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 10 Jul 2023 23:47:10 | WBPerson51134 | Name_change | CGC_name | slc-5A12 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | slc | ||||||||
| Allele (41) | |||||||||
| Strain | WBStrain00001221 | ||||||||
| WBStrain00032464 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00057527 | ||||||||
| 00057528 | |||||||||
| 00057529 | |||||||||
| 00057530 | |||||||||
| 00057531 | |||||||||
| 00057532 | |||||||||
| 00120820 | |||||||||
| 00120821 | |||||||||
| 00120822 | |||||||||
| Ortholog (65) | |||||||||
| Paralog | WBGene00018716 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00000501 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable symporter activity. Predicted to be involved in sodium ion transport. Predicted to be located in membrane. Expressed in several structures, including intestine; nervous system; non-striated muscle; pharynx; and rectal gland cell. Human ortholog(s) of this gene implicated in thyroid dyshormonogenesis 1. Is an ortholog of human SLC5A12 (solute carrier family 5 member 12) and SLC5A8 (solute carrier family 5 member 8). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0112185 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11040) | ||||
| DOID:0050328 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11040) | ||||||
| Molecular_info | Corresponding_CDS | ZK822.5 | |||||||
| Corresponding_CDS_history | ZK822.5b:wp288 | ||||||||
| Corresponding_transcript | ZK822.5.1 | ||||||||
| Other_sequence (23) | |||||||||
| Associated_feature | WBsf646436 | ||||||||
| WBsf660772 | |||||||||
| WBsf997993 | |||||||||
| WBsf229223 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00081182 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00022181 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059746 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038452 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059745 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1396 | ||||||||
| Expr7257 | |||||||||
| Expr7258 | |||||||||
| Expr1019115 | |||||||||
| Expr1036312 | |||||||||
| Expr1163169 | |||||||||
| Expr2008982 | |||||||||
| Expr2027218 | |||||||||
| Drives_construct | WBCnstr00002114 | ||||||||
| WBCnstr00004223 | |||||||||
| WBCnstr00029316 | |||||||||
| Construct_product | WBCnstr00029316 | ||||||||
| Microarray_results | SMD_ZK822.5 | ||||||||
| SMD_ZK829.1 | |||||||||
| 191860_at | |||||||||
| A_12_P101745 | |||||||||
| A_12_P142245 | |||||||||
| A_12_P142246 | |||||||||
| Aff_ZK822.5 | |||||||||
| GPL13394_WBGene00014092 | |||||||||
| GPL13914_ZK822.5 | |||||||||
| GPL14144_ZK822.5a_1263-1322_0.939_4_B | |||||||||
| GPL14144_ZK822.5a_1501-1560_0.944_2_C | |||||||||
| GPL14144_ZK822.5a_1554-1613_0.958_1_A | |||||||||
| GPL19516_CGZ0057594 | |||||||||
| GPL19516_CGZ0057595 | |||||||||
| GPL19516_CGZ0057596 | |||||||||
| GPL21109_ZK822.5a.1 | |||||||||
| GPL3518_CE18466 | |||||||||
| GPL8304_CE_WBGene00014092_A | |||||||||
| GPL8304_CE_WBGene00014092_B | |||||||||
| GPL8673_ZK822_5aP00234 | |||||||||
| GPL8673_ZK822_5aP00254 | |||||||||
| GPL8673_ZK822_5aP01543 | |||||||||
| GPL8673_ZK822_5bP00253 | |||||||||
| GPL8673_ZK822_5bP00591 | |||||||||
| GPL8673_ZK822_5bP01105 | |||||||||
| GPL9450_ZK822.5 | |||||||||
| cea2.c.33079 | |||||||||
| Expression_cluster (150) | |||||||||
| Interaction | WBInteraction000168579 | ||||||||
| WBInteraction000176079 | |||||||||
| WBInteraction000312436 | |||||||||
| WBInteraction000322518 | |||||||||
| WBInteraction000330941 | |||||||||
| WBInteraction000334386 | |||||||||
| WBInteraction000337242 | |||||||||
| WBInteraction000356101 | |||||||||
| WBInteraction000422069 | |||||||||
| WBInteraction000422268 | |||||||||
| WBInteraction000424162 | |||||||||
| WBInteraction000430038 | |||||||||
| WBInteraction000452102 | |||||||||
| WBInteraction000455616 | |||||||||
| WBInteraction000457851 | |||||||||
| Map_info | Map | IV | Position | 5.43389 | |||||
| Positive | Positive_clone | ZK822 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00034662 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
