WormBase Tree Display for Gene: WBGene00004492

WBGene00004492 SMap: S_parent: Sequence: F28D1
  Identity: Version: 1
    Name: CGC_name: rps-23
      Sequence_name: F28D1.7
      Molecular_name: F28D1.7a
        F28D1.7a.1
        CE05747
        F28D1.7b
      Other_name: CELE_F28D1.7 Accession_evidence: NDB BX284604
      Public_name: rps-23
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:35 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rps
    Allele (18)
    Legacy_information: Orthologous to yeast (S.cerevisiae) ribosomal protein rps23 using blastP
    Strain: WBStrain00001593
    RNASeq_FPKM (74)
    GO_annotation (17)
    Ortholog (40)
    Paralog: WBGene00011391 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: rps-23 encodes a small ribosomal subunit S23 protein; by homology, RPS-23 is predicted to function in protein biosynthesis; in C. elegans, RPS-23 activity is required for germline development, vulval morphogenesis, and the overall health of the animal. Paper_evidence: WBPaper00005654
          Curator_confirmed: WBPerson1843
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Predicted to be located in ribosome. Predicted to be part of cytosolic small ribosomal subunit and polysomal ribosome. Human ortholog(s) of this gene implicated in brachycephaly, trichomegaly, and developmental delay. Is an ortholog of human RPS23 (ribosomal protein S23). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0070415 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:10410)
  Molecular_info: Corresponding_CDS: F28D1.7a
    Corresponding_transcript: F28D1.7b
      F28D1.7a.1
    Other_sequence (360)
    Associated_feature: WBsf652292
      WBsf652293
      WBsf981835
      WBsf998102
      WBsf998103
      WBsf231013
      WBsf231014
      WBsf231015
  Experimental_info: RNAi_result (14)
    Expr_pattern: Chronogram525
      Expr5902
      Expr1028388
      Expr1032295
      Expr1149739
      Expr2015518
      Expr2033753
    Drives_construct: WBCnstr00002433
      WBCnstr00035444
    Construct_product: WBCnstr00035444
    Microarray_results: SMD_F28D1.7
      192686_at
      192687_s_at
      A_12_P101044
      A_12_P175669
      Aff_F28D1.7
      GPL13394_WBGene00004492
      GPL13914_F28D1.7
      GPL14144_F28D1.7_175-234_0.944_1_A
      GPL14144_F28D1.7_4-63_0.928_4_C
      GPL14144_F28D1.7_67-126_0.937_2_B
      GPL19516_CGZ0018703
      GPL19516_CGZ0018704
      GPL21109_F28D1.7.1
      GPL3518_CE05747
      GPL8304_CE_WBGene00004492_A
      GPL8673_F28D1_7P00005
      GPL8673_F28D1_7P00158
      GPL8673_F28D1_7P00163
      GPL9450_F28D1.7
      cea2.c.27835
    Expression_cluster (156)
    Interaction: WBInteraction000038397
      WBInteraction000038536
      WBInteraction000050946
      WBInteraction000103394
      WBInteraction000103836
      WBInteraction000103962
      WBInteraction000104128
      WBInteraction000104302
      WBInteraction000104681
      WBInteraction000106080
      WBInteraction000106231
      WBInteraction000108307
      WBInteraction000108338
      WBInteraction000108350
      WBInteraction000108402
      WBInteraction000108446
      WBInteraction000108531
      WBInteraction000108532
      WBInteraction000108533
      WBInteraction000108534
      WBInteraction000108535
      WBInteraction000108536
      WBInteraction000108537
      WBInteraction000108538
      WBInteraction000108539
      WBInteraction000108540
      WBInteraction000108541
      WBInteraction000108542
      WBInteraction000108543
      WBInteraction000108544
      WBInteraction000108545
      WBInteraction000108546
      WBInteraction000108547
      WBInteraction000108548
      WBInteraction000108549
      WBInteraction000108550
      WBInteraction000108551
      WBInteraction000108552
      WBInteraction000108625
      WBInteraction000108653
      WBInteraction000110195
      WBInteraction000110739
      WBInteraction000112388
      WBInteraction000112742
      WBInteraction000112941
      WBInteraction000113330
      WBInteraction000113453
      WBInteraction000114309
      WBInteraction000114377
      WBInteraction000114714
      WBInteraction000114754
      WBInteraction000114870
      WBInteraction000114898
      WBInteraction000115011
      WBInteraction000115240
      WBInteraction000115427
      WBInteraction000115516
      WBInteraction000115544
      WBInteraction000115783
      WBInteraction000117561
      WBInteraction000117574
      WBInteraction000117695
      WBInteraction000118137
      WBInteraction000118594
      WBInteraction000119105
      WBInteraction000119142
      WBInteraction000119277
      WBInteraction000119902
      WBInteraction000120331
      WBInteraction000121157
      WBInteraction000121437
      WBInteraction000121939
      WBInteraction000122395
      WBInteraction000124169
      WBInteraction000124399
      WBInteraction000124543
      WBInteraction000128050
      WBInteraction000128111
      WBInteraction000128145
      WBInteraction000128178
      WBInteraction000128212
      WBInteraction000128474
      WBInteraction000128993
      WBInteraction000129030
      WBInteraction000129067
      WBInteraction000129276
      WBInteraction000129409
      WBInteraction000129435
      WBInteraction000129903
      WBInteraction000129904
      WBInteraction000129905
      WBInteraction000129906
      WBInteraction000129907
      WBInteraction000129908
      WBInteraction000129909
      WBInteraction000129910
      WBInteraction000129911
      WBInteraction000129912
      WBInteraction000129913
      WBInteraction000129914
      WBInteraction000129915
      WBInteraction000129916
      WBInteraction000129917
      WBInteraction000129918
      WBInteraction000129919
      WBInteraction000129920
      WBInteraction000129921
      WBInteraction000129922
      WBInteraction000129923
      WBInteraction000129924
      WBInteraction000129925
      WBInteraction000132093
      WBInteraction000135057
      WBInteraction000135089
      WBInteraction000136552
      WBInteraction000140948
      WBInteraction000141295
      WBInteraction000142734
      WBInteraction000150106
      WBInteraction000150360
      WBInteraction000153025
      WBInteraction000154360
      WBInteraction000155072
      WBInteraction000155073
      WBInteraction000155074
      WBInteraction000155075
      WBInteraction000155357
      WBInteraction000155420
      WBInteraction000160518
      WBInteraction000170868
      WBInteraction000183286
      WBInteraction000184054
      WBInteraction000198789
      WBInteraction000216613
      WBInteraction000220107
      WBInteraction000227810
      WBInteraction000233556
      WBInteraction000237907
      WBInteraction000238959
      WBInteraction000245259
      WBInteraction000251476
      WBInteraction000259407
      WBInteraction000259408
      WBInteraction000266079
      WBInteraction000275807
      WBInteraction000276110
      WBInteraction000276465
      WBInteraction000290879
      WBInteraction000290966
      WBInteraction000296346
      WBInteraction000300267
      WBInteraction000301846
      WBInteraction000308091
      WBInteraction000308446
      WBInteraction000315751
      WBInteraction000325027
      WBInteraction000328574
      WBInteraction000331186
      WBInteraction000340053
      WBInteraction000353235
      WBInteraction000360344
      WBInteraction000362385
      WBInteraction000362670
      WBInteraction000364876
      WBInteraction000379369
      WBInteraction000385043
      WBInteraction000385934
      WBInteraction000389767
      WBInteraction000390141
      WBInteraction000396824
      WBInteraction000398606
      WBInteraction000404946
      WBInteraction000409429
      WBInteraction000426436
      WBInteraction000428569
      WBInteraction000434569
      WBInteraction000437299
      WBInteraction000446943
      WBInteraction000452000
      WBInteraction000455017
      WBInteraction000456938
      WBInteraction000457439
      WBInteraction000461951
      WBInteraction000462636
      WBInteraction000466218
      WBInteraction000466839
      WBInteraction000470904
      WBInteraction000470906
      WBInteraction000471112
      WBInteraction000472939
      WBInteraction000472949
      WBInteraction000474399
      WBInteraction000505082
      WBInteraction000505140
      WBInteraction000505141
      WBInteraction000541963
      WBInteraction000553992
      WBInteraction000554293
      WBInteraction000554963
      WBInteraction000555898
      WBInteraction000558825
      WBInteraction000560790
      WBInteraction000561900
      WBInteraction000562273
      WBInteraction000565731
      WBInteraction000567508
      WBInteraction000569350
      WBInteraction000570534
      WBInteraction000570626
      WBInteraction000570932
      WBInteraction000572367
      WBInteraction000572656
      WBInteraction000572920
      WBInteraction000573572
      WBInteraction000575779
      WBInteraction000576666
      WBInteraction000577458
      WBInteraction000577758
      WBInteraction000579293
      WBInteraction000583111
      WBInteraction000584630
      WBInteraction000585247
      WBInteraction000586195
  Map_info: Map: IV Position: 5.90161
    Positive: Positive_clone: F28D1 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00024230
    WBPaper00033166
    WBPaper00035215
    WBPaper00038491
    WBPaper00040293
    WBPaper00049828
    WBPaper00055090
    WBPaper00061547
    WBPaper00062338
    WBPaper00065988
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene