WormBase Tree Display for Gene: WBGene00004681
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| WBGene00004681 | SMap | S_parent | Sequence | F52G2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name (5) | |||||||||
| DB_info | Database | WormQTL | gene | WBGene00004681 | |||||
| WormFlux | gene | WBGene00004681 | |||||||
| NDB | locus_tag | CELE_F52G2.2 | |||||||
| NCBI | gene | 178322 | |||||||
| RefSeq | protein | NM_001268821.3 | |||||||
| NM_001268820.3 | |||||||||
| NM_001047487.3 | |||||||||
| NM_001047488.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF342966 | |||||||
| TrEMBL | UniProtAcc | Q9XUE3 | |||||||
| Q2EEN1 | |||||||||
| D3YT78 | |||||||||
| E1B6W0 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9XUE3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:36 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rsd | ||||||||
| Allele (379) | |||||||||
| Possibly_affected_by | WBVar02153172 | ||||||||
| Strain | WBStrain00029011 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00080292 | ||||||||
| 00080293 | |||||||||
| 00080294 | |||||||||
| 00101707 | |||||||||
| 00101708 | |||||||||
| 00101709 | |||||||||
| Contained_in_operon | CEOP4556 | ||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00010571 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Automated_description | Located in cytoplasm and nucleolus. Expressed in germ cell. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F52G2.2a | |||||||
| F52G2.2b | |||||||||
| F52G2.2c | |||||||||
| F52G2.2d | |||||||||
| Corresponding_CDS_history | F52G2.2a:wp169 | ||||||||
| Corresponding_transcript | F52G2.2a.1 | ||||||||
| F52G2.2b.1 | |||||||||
| F52G2.2c.1 | |||||||||
| F52G2.2d.1 | |||||||||
| Other_sequence (14) | |||||||||
| Associated_feature | WBsf652348 | ||||||||
| WBsf668508 | |||||||||
| WBsf668509 | |||||||||
| WBsf977026 | |||||||||
| WBsf977027 | |||||||||
| WBsf998426 | |||||||||
| WBsf1018546 | |||||||||
| WBsf231141 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00069206 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00069204 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048015 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00069207 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032634 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00069205 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11270 | ||||||||
| Expr12002 | |||||||||
| Expr12003 | |||||||||
| Expr15059 | |||||||||
| Expr1025298 | |||||||||
| Expr1032315 | |||||||||
| Expr1151832 | |||||||||
| Expr2015549 | |||||||||
| Expr2033784 | |||||||||
| Construct_product | WBCnstr00018528 | ||||||||
| Regulate_expr_cluster | WBPaper00045809:rsd-2(yp10)_downregulated | ||||||||
| Antibody | WBAntibody00002565 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (117) | |||||||||
| Interaction (43) | |||||||||
| WBProcess | WBbiopr:00000008 | ||||||||
| WBbiopr:00000039 | |||||||||
| Map_info | Map | IV | Position | 9.49736 | Error | 0.079947 | |||
| Positive | Positive_clone | F25G2 | |||||||
| F52G2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
| Mapping_data | Multi_point | 4585 | |||||||
| 4618 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (18) | |||||||||
| Remark | rsd-2 was mistakenly connected to F25G2.2 | Person_evidence | WBPerson1521 | ||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
