WormBase Tree Display for Gene: WBGene00002217
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| WBGene00002217 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | klp-4 | Person_evidence | WBPerson589 | |||||
| Sequence_name | F56E3.3 | ||||||||
| Molecular_name | F56E3.3a | ||||||||
| F56E3.3a.1 | |||||||||
| CE53151 | |||||||||
| F56E3.3b | |||||||||
| CE53222 | |||||||||
| F56E3.3b.1 | |||||||||
| Other_name | CELE_F56E3.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | klp-4 | ||||||||
| DB_info | Database | AceView | gene | XD790 | |||||
| WormQTL | gene | WBGene00002217 | |||||||
| WormFlux | gene | WBGene00002217 | |||||||
| NDB | locus_tag | CELE_F56E3.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00002217|UniProtKB=Q8MQ20 | |||||||
| family | PTHR24115 | ||||||||
| NCBI | gene | 180608 | |||||||
| RefSeq | protein | NM_001392742.1 | |||||||
| NM_001373257.3 | |||||||||
| TrEMBL | UniProtAcc | Q8MQ20 | |||||||
| Q20888 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8MQ20 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:27 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | klp | ||||||||
| Allele (100) | |||||||||
| Possibly_affected_by | WBVar02153217 | ||||||||
| Legacy_information | [Siddiqui SS ] Predicted gene F56E3.3. Related to kinesin like protein by sequence similarity. | ||||||||
| Strain | WBStrain00001888 | ||||||||
| WBStrain00033221 | |||||||||
| WBStrain00047350 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (22) | |||||||||
| Ortholog (42) | |||||||||
| Paralog (19) | |||||||||
| Structured_description | Concise_description | klp-4 encodes a kinesin-like motor protein paralogous to UNC-104 and KLP-6 and orthologous to Drosophila KHC-73 and the vertebrate KIF1A, KIF13B, and GAKIN motor proteins; as loss of KLP-4 function via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of KLP-4 in C. elegans development and/or behavior is not yet known; based on sequence similarity, however, KLP-4 is predicted to play a role in neuronal development or function; a klp-4::gfp transcriptional reporter fusion is expressed in larvae and adults in the pharynx, intestine, and nervous system, including head and tail neurons, the nerve ring, and ventral nerve cord. | Paper_evidence | WBPaper00005076 | |||||
| WBPaper00005654 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 14 Nov 2005 00:00:00 | ||||||||
| Automated_description | Predicted to enable ATP hydrolysis activity; microtubule binding activity; and microtubule motor activity. Predicted to be involved in cytoskeleton-dependent intracellular transport and microtubule-based movement. Located in axon; cytoplasmic microtubule; and neuronal cell body. Expressed in distal tip cell; dorsal nerve cord; head; and ventral nerve cord. Is an ortholog of human KIF13A (kinesin family member 13A) and KIF13B (kinesin family member 13B). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F56E3.3a | |||||||
| F56E3.3b | |||||||||
| Corresponding_CDS_history | F56E3.3a:wp271 | ||||||||
| F56E3.3b:wp271 | |||||||||
| F56E3.3c:wp271 | |||||||||
| Corresponding_transcript | F56E3.3a.1 | ||||||||
| F56E3.3b.1 | |||||||||
| Other_sequence (71) | |||||||||
| Associated_feature (16) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032966 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048730 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015836 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00111058 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6225 | ||||||||
| Expr10536 | |||||||||
| Expr15133 | |||||||||
| Expr1011100 | |||||||||
| Expr1031297 | |||||||||
| Expr1152483 | |||||||||
| Expr1200197 | |||||||||
| Expr2012965 | |||||||||
| Expr2031197 | |||||||||
| Drives_construct | WBCnstr00002679 | ||||||||
| WBCnstr00014914 | |||||||||
| WBCnstr00014915 | |||||||||
| WBCnstr00036379 | |||||||||
| Construct_product | WBCnstr00014841 | ||||||||
| WBCnstr00014909 | |||||||||
| WBCnstr00014910 | |||||||||
| WBCnstr00014911 | |||||||||
| WBCnstr00014912 | |||||||||
| WBCnstr00014913 | |||||||||
| WBCnstr00021738 | |||||||||
| WBCnstr00036379 | |||||||||
| Microarray_results (36) | |||||||||
| Expression_cluster (170) | |||||||||
| Interaction (35) | |||||||||
| Map_info | Map | X | Position | -11.4485 | Error | 0.221764 | |||
| Positive | Positive_clone | F56E3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5603 | |||||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
