WormBase Tree Display for Gene: WBGene00000493
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| WBGene00000493 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F56H1 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | che-14 | Person_evidence | WBPerson261 | |||||
| Sequence_name | F56H1.1 | ||||||||
| Molecular_name | F56H1.1 | ||||||||
| F56H1.1.1 | |||||||||
| CE28468 | |||||||||
| Other_name | ptd-1 | ||||||||
| CELE_F56H1.1 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | che-14 | ||||||||
| DB_info | Database | AceView | gene | 1G329 | |||||
| WormQTL | gene | WBGene00000493 | |||||||
| WormFlux | gene | WBGene00000493 | |||||||
| NDB | locus_tag | CELE_F56H1.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000493|UniProtKB=G5EEW0 | |||||||
| family | PTHR45951 | ||||||||
| NCBI | gene | 172240 | |||||||
| RefSeq | protein | NM_059272.6 | |||||||
| TREEFAM | TREEFAM_ID | TF316709 | |||||||
| TrEMBL | UniProtAcc | G5EEW0 | |||||||
| UniProt_GCRP | UniProtAcc | G5EEW0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | che | ||||||||
| Reference_allele | WBVar00144429 | ||||||||
| Allele (77) | |||||||||
| Legacy_information | e1960 : some FITC uptake by amphids but not by phasmids; abnormal uptake by CEP ADE PDE; abnormal amphid channel due to misjoining of sheath and socket cell. ES1. NA1. | ||||||||
| See also e1960 | |||||||||
| [C.elegansII] e1960 : some FITC uptake by amphids but not by phasmids; abnormal uptake by CEP ADE PDE; abnormal amphid channel due to misjoining of sheath and socket cell. ES1. NA1. [Perkins et al. 1986] | |||||||||
| Strain | WBStrain00026569 | ||||||||
| WBStrain00004500 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00017008 | ||||||||
| 00017009 | |||||||||
| 00017010 | |||||||||
| 00017011 | |||||||||
| 00017012 | |||||||||
| 00017013 | |||||||||
| 00017014 | |||||||||
| Ortholog (36) | |||||||||
| Paralog (30) | |||||||||
| Structured_description | Concise_description | che-14 encodes a protein with a sterol-sensing domain that is similar to the Drosophila and mammalian proteins Dispatched; CHE-14 protein is involved in the exocytotic secretion of lipid-modified proteins at the apical surface of certain epithelial cells. | Paper_evidence | WBPaper00004384 | |||||
| WBPaper00025237 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 24 Oct 2011 00:00:00 | ||||||||
| Automated_description | Predicted to enable transmembrane transporter activity. Predicted to be involved in smoothened signaling pathway. Located in apical plasma membrane. Expressed in epithelial cell; excretory system; hypodermis; rectum; and vulva. Is an ortholog of human DISP1 (dispatched RND transporter family member 1) and DISP2 (dispatched RND transporter family member 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F56H1.1 | |||||||
| Corresponding_transcript | F56H1.1.1 | ||||||||
| Other_sequence (15) | |||||||||
| Associated_feature (9) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00103399 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003821 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032984 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048766 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1111 | ||||||||
| Expr1021164 | |||||||||
| Expr1030291 | |||||||||
| Expr1152514 | |||||||||
| Expr2009963 | |||||||||
| Expr2028203 | |||||||||
| Marker33 | |||||||||
| Drives_construct | WBCnstr00000934 | ||||||||
| WBCnstr00008191 | |||||||||
| WBCnstr00010084 | |||||||||
| WBCnstr00019114 | |||||||||
| WBCnstr00037498 | |||||||||
| Construct_product | WBCnstr00000934 | ||||||||
| WBCnstr00008191 | |||||||||
| WBCnstr00010084 | |||||||||
| WBCnstr00019114 | |||||||||
| WBCnstr00037498 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (218) | |||||||||
| Interaction (42) | |||||||||
| WBProcess | WBbiopr:00000123 | ||||||||
| Map_info | Map | I | Position | 0.439693 | Error | 0.002062 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | F56H1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 986 | |||||||
| 5422 | |||||||||
| Reference (56) | |||||||||
| Remark | The ptd-1 gene was merged into this gene following the advice of J. Hodgkin. 02/06/11 krb. | ||||||||
| Sequence connection from [Michaux G, Labouesse M], 02/06/14 krb. | |||||||||
| Method | Gene |
