Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00044305

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00044305SMapS_parentSequenceF56H1
IdentityVersion2
NameCGC_namerad-8Paper_evidenceWBPaper00040163
Sequence_nameF56H1.6
Molecular_nameF56H1.6
F56H1.6.1
CE45632
Other_nameCELE_F56H1.6Accession_evidenceNDBBX284601
Public_namerad-8
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change121 Apr 2005 09:44:29WBPerson1867EventCreated
223 Sep 2011 16:44:07WBPerson2970EventAcquires_mergeWBGene00004294
Name_changeCGC_namerad-8
Acquires_mergeWBGene00004294
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrad
Reference_alleleWBVar00089079
Allele (12)
Legacy_informationmn163 : hypersensitive to UV not to X irradiation or MMS. Reduced brood size (7% of wildtype) young hermaphrodites lay many inviable eggs. ES1 ME0. NA1.
[C.elegansII] mn163 : hypersensitive to UV not to X irradiation or MMS. Reduced brood size (7% of wildtype), young hermaphrodites lay many inviable eggs. Hypersensitive to paraquat, high oxygen concentration (lethal at 60%) (see also mev); increased lifespan at 16C.ES1 ME0. NA1. [Hartman and Herman 1982; Ishii et al. 1994; TJ; TK; PH]
StrainWBStrain00030672
RNASeq_FPKM (74)
GO_annotation (19)
OrthologWBGene00033746Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00056276Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00157420Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00112604Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00193424Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00138275Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00076967Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00231555Brugia malayiFrom_analysisWormBase-Compara
CSP21.g10667Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g10669Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g16241Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13157Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g11839Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g5850Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g17125Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g14291Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g3815Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g789Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00052.g2696Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-rad-8Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold58.g371Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01266.g19694Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18013Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001955Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12040Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g5373Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10275700Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g986Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00236899Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00262546Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293119Trichuris murisFrom_analysisWormBase-Compara
SGD:S000004760Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Panther
SGD:S000005078Saccharomyces cerevisiaeFrom_analysisInparanoid
OrthoInspector
FB:FBgn0031500Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
ZFIN:ZDB-GENE-040426-1314Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
HGNC:18647Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:2178759Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
RGD:1563384Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
Paralog (11)
Structured_descriptionConcise_descriptionrad-8 encodes a protein with similarity to dehydrogenases/reductases that is orthologous to the human mitochondrial protein RTN4IP1 (reticulon 4 interacting protein 1); rad-8 was identified in screens for loci that when mutated result in abnormal radiation sensitivity; rad-8 mutant animals are hypersensitive to ultraviolet irradiation, methyl viologen (paraquat) treatment, high concentrations of oxygen (50% or greater), and pathogen infection; young adult rad-8 hermaphrodites produce many inviable embryos, but fertility increases as the animals age; rad-8 mutant animals are also long-lived at 16 degrees C, but not at 20 degrees C; a RAD-8::GFP fusion protein is widely expressed and seen in the neurons, pharynx, muscles, and intestine; a RAD-8::GFP fusion protein localizes to mitochondrion; increased oxygen sensitivity displayed by rad-8 mutants can be rescued by overexpression of human RTN4IP1.Paper_evidenceWBPaper00000565
WBPaper00001740
WBPaper00001944
WBPaper00002196
WBPaper00040163
WBPaper00003366
Curator_confirmedWBPerson1843
Date_last_updated03 Apr 2014 00:00:00
Automated_descriptionPredicted to enable oxidoreductase activity. Involved in several processes, including defense response to other organism; positive regulation of growth rate; and response to superoxide. Located in mitochondrion. Expressed in several structures, including intestine; muscle cell; neurons; and pharynx. Human ortholog(s) of this gene implicated in optic atrophy 10. Is an ortholog of human RTN4IP1 (reticulon 4 interacting protein 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0111434Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:18647)
Molecular_infoCorresponding_CDSF56H1.6
Corresponding_CDS_historyF56H1.6:wp221
Corresponding_transcriptF56H1.6.1
Other_sequence (24)
Associated_featureWBsf643308
WBsf656327
WBsf217703
Experimental_infoRNAi_resultWBRNAi00117135Inferred_automaticallyRNAi_primary
Expr_patternExpr9670
Expr1020437
Expr1040219
Expr1152520
Expr2015243
Expr2033477
Drives_constructWBCnstr00014213
WBCnstr00023642
Construct_productWBCnstr00014213
WBCnstr00023642
Microarray_results (14)
Expression_cluster (68)
InteractionWBInteraction000565967
WBProcessWBbiopr:00000014
Map_infoPositivePositive_cloneF56H1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point372
373
3548
Interpolated_map_positionI0.434476
Reference (36)
MethodGene