WormBase Tree Display for Gene: WBGene00015735
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WBGene00015735 | SMap | S_parent | Sequence | C13B9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | pdfr-1 | Paper_evidence | WBPaper00031656 | |||||
Person_evidence | WBPerson3516 | ||||||||
WBPerson3480 | |||||||||
Sequence_name | C13B9.4 | ||||||||
Molecular_name (23) | |||||||||
Other_name | seb-1 | Person_evidence | WBPerson3006 | ||||||
WBPerson1263 | |||||||||
CELE_C13B9.4 | Accession_evidence | NDB | BX284603 | ||||||
Public_name | pdfr-1 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 18 Apr 2008 13:26:44 | WBPerson2970 | Name_change | CGC_name | pdfr-1 | ||||
3 | 29 Aug 2012 16:49:31 | WBPerson2970 | Name_change | Other_name | seb-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pdfr | ||||||||
Allele (246) | |||||||||
Strain (11) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00054021 | ||||||||
00054022 | |||||||||
00054023 | |||||||||
00054024 | |||||||||
00054025 | |||||||||
00054026 | |||||||||
00054027 | |||||||||
00054028 | |||||||||
00054029 | |||||||||
00054030 | |||||||||
00054031 | |||||||||
00054032 | |||||||||
00054033 | |||||||||
00054034 | |||||||||
00054035 | |||||||||
00054036 | |||||||||
00054037 | |||||||||
00054038 | |||||||||
00054039 | |||||||||
00054040 | |||||||||
00054041 | |||||||||
00054042 | |||||||||
00054043 | |||||||||
00054044 | |||||||||
00054045 | |||||||||
00054046 | |||||||||
00054047 | |||||||||
00104936 | |||||||||
00121519 | |||||||||
00121520 | |||||||||
00121521 | |||||||||
Ortholog (47) | |||||||||
Paralog | WBGene00007664 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00014035 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00002251 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00002252 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00009304 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00017947 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00017948 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description (2) | |||||||||
Disease_info | Potential_model | DOID:0080020 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9608) | ||||
DOID:0050580 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:16709) | ||||||
DOID:0060387 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9608) | ||||||
DOID:2256 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9608) | ||||||
DOID:0111341 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9608) | ||||||
DOID:11476 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1440) | ||||||
DOID:0111732 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9608) | ||||||
Molecular_info | Corresponding_CDS | C13B9.4a | |||||||
C13B9.4b | |||||||||
C13B9.4c | |||||||||
C13B9.4d | |||||||||
C13B9.4e | |||||||||
Corresponding_CDS_history | C13B9.4:wp127 | ||||||||
Corresponding_transcript (13) | |||||||||
Other_sequence (25) | |||||||||
Associated_feature (24) | |||||||||
Experimental_info | RNAi_result | WBRNAi00010677 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00005367 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00027171 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00040427 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00024543 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00024544 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00028838 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (15) | |||||||||
Drives_construct | WBCnstr00002179 | ||||||||
WBCnstr00002180 | |||||||||
WBCnstr00004248 | |||||||||
WBCnstr00004988 | |||||||||
WBCnstr00015834 | |||||||||
WBCnstr00015836 | |||||||||
WBCnstr00019100 | |||||||||
WBCnstr00021690 | |||||||||
WBCnstr00021702 | |||||||||
WBCnstr00028610 | |||||||||
Construct_product (12) | |||||||||
Antibody | WBAntibody00001399 | ||||||||
Microarray_results (36) | |||||||||
Expression_cluster (224) | |||||||||
Interaction (12) | |||||||||
Map_info | Map | III | Position | -1.02511 | Error | 0.00506 | |||
Positive | Positive_clone | C13B9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (36) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |